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- W2041201418 abstract "Summary Networks offer a flexible framework to represent and analyse the complex interactions between components of cellular systems. In particular gene networks inferred from expression data can support the identification of novel hypotheses on regulatory processes. In this review we focus on the use of gene network analysis in the study of heart development. Understanding heart development will promote the elucidation of the aetiology of congenital heart disease and thus possibly improve diagnostics. Moreover, it will help to establish cardiac therapies. For example, understanding cardiac differentiation during development will help to guide stem cell differentiation required for cardiac tissue engineering or to enhance endogenous repair mechanisms. We introduce different methodological frameworks to infer networks from expression data such as Boolean and Bayesian networks. Then we present currently available temporal expression data in heart development and discuss the use of network-based approaches in published studies. Collectively, our literature-based analysis indicates that gene network analysis constitutes a promising opportunity to infer therapy-relevant regulatory processes in heart development. However, the use of network-based approaches has so far been limited by the small amount of samples in available datasets. Thus, we propose to acquire high-resolution temporal expression data to improve the mathematical descriptions of regulatory processes obtained with gene network inference methodologies. Especially probabilistic methods that accommodate the intrinsic variability of biological systems have the potential to contribute to a deeper understanding of heart development." @default.
- W2041201418 created "2016-06-24" @default.
- W2041201418 creator A5050932220 @default.
- W2041201418 creator A5067328535 @default.
- W2041201418 creator A5080682676 @default.
- W2041201418 date "2015-05-01" @default.
- W2041201418 modified "2023-09-25" @default.
- W2041201418 title "Gene network analysis: from heart development to cardiac therapy" @default.
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- W2041201418 doi "https://doi.org/10.1160/th14-06-0483" @default.
- W2041201418 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/25231088" @default.
- W2041201418 hasPublicationYear "2015" @default.
- W2041201418 type Work @default.