FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3010163006> ?p ?o ?g. }

• W3010163006 abstract "Pectin methylesterase (PME, EC 3.1.1.11) is a hydrolytic enzyme of pectin that plays multiple roles in different plant development processes and responses to biotic stress. To characterize the molecular evolution and functional divergence of the PME gene family, a genome-wide analysis of the PME gene family in the tomato was performed. In total, 57 non-redundant PME genes were identified, and these PME genes were divided into five groups based on their phylogeneny; their classification was supported by similar gene structures and domain distributions. The PME genes were found to be unevenly distributed among 12 chromosomes of the tomato. In addition, 11 segmental duplication and 11 tandem duplication events occurred in these PME genes, implying that both contributed to the expansion of the tomato PME gene family. Non-synonymous/synonymous mutation ratio analysis revealed that positive selection played a key role in the functional divergence of PME genes. Interspecific collinear analysis indicated a large divergence in the PME gene family after the divergence of monocot and dicot plants in ancient times. Gene expression pattern analysis suggested that PMEs plays roles in the different parts of the tomato plant, including the fruit. Three newly identified candidate genes (Solyc03g083360, Solyc07g071600, and Solyc12g098340) may have functions during fruit ripening. Immunoassays suggested that the tomato isoform PE1 and PE2 may change pectin structure at cell junctions, which could be associated with fruit softening. In addition, our analysis indicate that two undescribed PE isoforms might be active in leaves and fruits. This study increases our understanding of the PME gene family in the tomato and may facilitate further functional analyses to elucidate PME function, especially during fruit ripening." @default.
• W3010163006 created "2020-03-13" @default.
• W3010163006 creator A5001014826 @default.
• W3010163006 creator A5040861329 @default.
• W3010163006 creator A5052274720 @default.
• W3010163006 creator A5076352375 @default.
• W3010163006 date "2020-03-03" @default.
• W3010163006 modified "2023-10-16" @default.
• W3010163006 title "Characterization of the Tomato (Solanum lycopersicum) Pectin Methylesterases: Evolution, Activity of Isoforms and Expression During Fruit Ripening" @default.
• W3010163006 cites W1487019814 @default.
• W3010163006 cites W1494075612 @default.
• W3010163006 cites W1516109259 @default.
• W3010163006 cites W1914610732 @default.
• W3010163006 cites W1963908376 @default.
• W3010163006 cites W1970781473 @default.
• W3010163006 cites W1972319704 @default.
• W3010163006 cites W1975957489 @default.
• W3010163006 cites W1979166496 @default.
• W3010163006 cites W1982372752 @default.
• W3010163006 cites W1994829204 @default.
• W3010163006 cites W2001481706 @default.
• W3010163006 cites W2007306716 @default.
• W3010163006 cites W2017519756 @default.
• W3010163006 cites W2018108021 @default.
• W3010163006 cites W2021002576 @default.
• W3010163006 cites W2021229610 @default.
• W3010163006 cites W2024172842 @default.
• W3010163006 cites W2025253065 @default.
• W3010163006 cites W2030711519 @default.
• W3010163006 cites W2033766616 @default.
• W3010163006 cites W2038574100 @default.
• W3010163006 cites W2042548242 @default.
• W3010163006 cites W2049606282 @default.
• W3010163006 cites W2051558036 @default.
• W3010163006 cites W2060974142 @default.
• W3010163006 cites W2062467160 @default.
• W3010163006 cites W2069511429 @default.
• W3010163006 cites W2072566600 @default.
• W3010163006 cites W2075504904 @default.
• W3010163006 cites W2089070721 @default.
• W3010163006 cites W2092392945 @default.
• W3010163006 cites W2096428294 @default.
• W3010163006 cites W2101016028 @default.
• W3010163006 cites W2103880356 @default.
• W3010163006 cites W2107277218 @default.
• W3010163006 cites W2107915254 @default.
• W3010163006 cites W2111093661 @default.
• W3010163006 cites W2112907855 @default.
• W3010163006 cites W2119205648 @default.
• W3010163006 cites W2122598328 @default.
• W3010163006 cites W2124163663 @default.
• W3010163006 cites W2137450588 @default.
• W3010163006 cites W2140455347 @default.
• W3010163006 cites W2143793098 @default.
• W3010163006 cites W2145699969 @default.
• W3010163006 cites W2152207030 @default.
• W3010163006 cites W2153189211 @default.
• W3010163006 cites W2156264856 @default.
• W3010163006 cites W2157009395 @default.
• W3010163006 cites W2159513571 @default.
• W3010163006 cites W2163450836 @default.
• W3010163006 cites W2170254955 @default.
• W3010163006 cites W2255452584 @default.
• W3010163006 cites W2311203695 @default.
• W3010163006 cites W2554057004 @default.
• W3010163006 cites W2625241189 @default.
• W3010163006 cites W2765915407 @default.
• W3010163006 cites W2781654001 @default.
• W3010163006 cites W2796624285 @default.
• W3010163006 cites W2804198663 @default.
• W3010163006 cites W2896261192 @default.
• W3010163006 cites W634726708 @default.
• W3010163006 cites W1964184380 @default.
• W3010163006 doi "https://doi.org/10.3389/fpls.2020.00238" @default.
• W3010163006 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/7063471" @default.
• W3010163006 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/32194610" @default.
• W3010163006 hasPublicationYear "2020" @default.
• W3010163006 type Work @default.
• W3010163006 sameAs 3010163006 @default.
• W3010163006 citedByCount "17" @default.
• W3010163006 countsByYear W30101630062021 @default.
• W3010163006 countsByYear W30101630062022 @default.
• W3010163006 countsByYear W30101630062023 @default.
• W3010163006 crossrefType "journal-article" @default.
• W3010163006 hasAuthorship W3010163006A5001014826 @default.
• W3010163006 hasAuthorship W3010163006A5040861329 @default.
• W3010163006 hasAuthorship W3010163006A5052274720 @default.
• W3010163006 hasAuthorship W3010163006A5076352375 @default.
• W3010163006 hasBestOaLocation W30101630061 @default.
• W3010163006 hasConcept C102230213 @default.
• W3010163006 hasConcept C103077935 @default.
• W3010163006 hasConcept C104317684 @default.
• W3010163006 hasConcept C119795356 @default.
• W3010163006 hasConcept C122172344 @default.
• W3010163006 hasConcept C150194340 @default.
• W3010163006 hasConcept C156446351 @default.
• W3010163006 hasConcept C172353545 @default.
• W3010163006 hasConcept C181199279 @default.
• W3010163006 hasConcept C2780756937 @default.
• W3010163006 hasConcept C2781083041 @default.

• next