FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4328114003> ?p ?o ?g. }

• W4328114003 abstract "Introduction Oat ( Avena sativa L.) is an important cereal crop grown worldwide for grain and forage, owing to its high adaptability to diverse environments. However, the genetic and genomics research of oat is lagging behind that of other staple cereal crops. Methods In this study, a collection of 288 oat lines originating worldwide was evaluated using 2,213 single nucleotide polymorphism (SNP) markers obtained from an oat iSelect 6K-beadchip array to study its genetic diversity, population structure, and linkage disequilibrium (LD) as well as the genotype–phenotype association for hullessness and lemma color. Results The average gene diversity and polymorphic information content (PIC) were 0.324 and 0.262, respectively. The first three principal components (PCs) accounted for 30.33% of the genetic variation, indicating that the population structure of this panel of oat lines was stronger than that reported in most previous studies. In addition, accessions could be classified into two subpopulations using a Bayesian clustering approach, and the clustering pattern of accessions was closely associated with their region of origin. Additionally, evaluation of LD decay using 2,143 mapped markers revealed that the intrachromosomal whole-genome LD decayed rapidly to a critical r 2 value of 0.156 for marker pairs separated by a genetic distance of 1.41 cM. Genome-wide association study (GWAS) detected six significant associations with the hullessness trait. Four of these six markers were located on the Mrg21 linkage group between 194.0 and 205.7 cM, while the other two significant markers mapped to Mrg05 and Mrg09. Three significant SNPs, showing strong association with lemma color, were located on linkage groups Mrg17, Mrg18, and Mrg20. Discussion Our results discerned relevant patterns of genetic diversity, population structure, and LD among members of a worldwide collection of oat landraces and cultivars proposed to be ‘typical’ of the Qinghai-Tibetan Plateau. These results have important implications for further studies on association mapping and practical breeding in high-altitude oat." @default.
• W4328114003 created "2023-03-22" @default.
• W4328114003 creator A5011877804 @default.
• W4328114003 creator A5016155906 @default.
• W4328114003 creator A5020984974 @default.
• W4328114003 creator A5031524228 @default.
• W4328114003 creator A5041100767 @default.
• W4328114003 creator A5066592864 @default.
• W4328114003 creator A5073216396 @default.
• W4328114003 creator A5073463506 @default.
• W4328114003 creator A5091105534 @default.
• W4328114003 date "2023-03-21" @default.
• W4328114003 modified "2023-09-30" @default.
• W4328114003 title "Population structure analysis and genome-wide association study of a hexaploid oat landrace and cultivar collection" @default.
• W4328114003 cites W193813456 @default.
• W4328114003 cites W1965436613 @default.
• W4328114003 cites W1966564974 @default.
• W4328114003 cites W1973413549 @default.
• W4328114003 cites W1976767738 @default.
• W4328114003 cites W1983571204 @default.
• W4328114003 cites W1985387225 @default.
• W4328114003 cites W1991030785 @default.
• W4328114003 cites W2000486602 @default.
• W4328114003 cites W2004387201 @default.
• W4328114003 cites W2017159017 @default.
• W4328114003 cites W2029397699 @default.
• W4328114003 cites W2033151532 @default.
• W4328114003 cites W2034153125 @default.
• W4328114003 cites W2035674262 @default.
• W4328114003 cites W2048994525 @default.
• W4328114003 cites W2050642876 @default.
• W4328114003 cites W2050861435 @default.
• W4328114003 cites W2050868322 @default.
• W4328114003 cites W2062254725 @default.
• W4328114003 cites W2063490090 @default.
• W4328114003 cites W2083904164 @default.
• W4328114003 cites W2086399523 @default.
• W4328114003 cites W2093887105 @default.
• W4328114003 cites W2098126593 @default.
• W4328114003 cites W2110010378 @default.
• W4328114003 cites W2110035718 @default.
• W4328114003 cites W2131693569 @default.
• W4328114003 cites W2138169725 @default.
• W4328114003 cites W2140682272 @default.
• W4328114003 cites W2141616651 @default.
• W4328114003 cites W2152207030 @default.
• W4328114003 cites W2161339576 @default.
• W4328114003 cites W2161975839 @default.
• W4328114003 cites W2163992044 @default.
• W4328114003 cites W2169509583 @default.
• W4328114003 cites W2277864219 @default.
• W4328114003 cites W2297684224 @default.
• W4328114003 cites W2381442710 @default.
• W4328114003 cites W2422857679 @default.
• W4328114003 cites W2435347864 @default.
• W4328114003 cites W2478161578 @default.
• W4328114003 cites W2511095854 @default.
• W4328114003 cites W2579843327 @default.
• W4328114003 cites W2731986855 @default.
• W4328114003 cites W2886207591 @default.
• W4328114003 cites W2899296757 @default.
• W4328114003 cites W2923797131 @default.
• W4328114003 cites W2949349035 @default.
• W4328114003 cites W2962627674 @default.
• W4328114003 cites W2991467126 @default.
• W4328114003 cites W2992195058 @default.
• W4328114003 cites W3083759633 @default.
• W4328114003 cites W3091148134 @default.
• W4328114003 cites W3159246407 @default.
• W4328114003 cites W3176772118 @default.
• W4328114003 cites W4285727773 @default.
• W4328114003 doi "https://doi.org/10.3389/fpls.2023.1131751" @default.
• W4328114003 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37025134" @default.
• W4328114003 hasPublicationYear "2023" @default.
• W4328114003 type Work @default.
• W4328114003 citedByCount "0" @default.
• W4328114003 crossrefType "journal-article" @default.
• W4328114003 hasAuthorship W4328114003A5011877804 @default.
• W4328114003 hasAuthorship W4328114003A5016155906 @default.
• W4328114003 hasAuthorship W4328114003A5020984974 @default.
• W4328114003 hasAuthorship W4328114003A5031524228 @default.
• W4328114003 hasAuthorship W4328114003A5041100767 @default.
• W4328114003 hasAuthorship W4328114003A5066592864 @default.
• W4328114003 hasAuthorship W4328114003A5073216396 @default.
• W4328114003 hasAuthorship W4328114003A5073463506 @default.
• W4328114003 hasAuthorship W4328114003A5091105534 @default.
• W4328114003 hasBestOaLocation W43281140031 @default.
• W4328114003 hasConcept C104317684 @default.
• W4328114003 hasConcept C106208931 @default.
• W4328114003 hasConcept C135763542 @default.
• W4328114003 hasConcept C144024400 @default.
• W4328114003 hasConcept C149923435 @default.
• W4328114003 hasConcept C153209595 @default.
• W4328114003 hasConcept C186413461 @default.
• W4328114003 hasConcept C2777461220 @default.
• W4328114003 hasConcept C2779908699 @default.
• W4328114003 hasConcept C2908647359 @default.
• W4328114003 hasConcept C35605836 @default.
• W4328114003 hasConcept C54355233 @default.
• W4328114003 hasConcept C59822182 @default.

• next