FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W1498278052> ?p ?o ?g. }

• W1498278052 abstract "Carnation (Dianthus caryophyllus L.) is an important flower crop, having substantial commercial value as a cut-flower due to the long vase-life and wide array of flower colors and forms. Standard carnation varieties perform well under cool climates but are very susceptible to high temperatures which adversely affect the yield and the quality of the cut-flowers. Despite several studies of carnation contributing to the number of expressed sequence tags (ESTs), transcriptomic information of this species remains very limited, particularly regarding abiotic stress-related genes. Here, transcriptome analysis was performed to generate expression profiles of heat stress (HS)-responsive genes in carnation. We sequenced a cDNA library constructed with mixed RNA from carnation leaves subjected to 42°C HS (0, 0.5, 1, and 2 h) and 46°C HS (0.5, 1, and 2 h), and obtained 45,604,882 high quality paired-end reads. After de novo assembly and quantitative assessment 99,255 contigs were generated with an average length of 1053 bp. We then obtained functional annotations by aligning contigs with public protein databases including NR, SwissProt, KEGG, and COG. Using the above carnation transcriptome as the reference, we compared the effects of high temperature treatments (42°C: duration 0.5, 2, or 12 h) delivered to aseptic carnation seedlings, relative to untreated controls, using the FPKM metric. Overall, 11,471 genes were identified which showed a significant response to one or more of the three HS treatment times. In addition, based on GO and metabolic pathway enrichment analyses, a series of candidate genes involved in thermo-tolerance responses were selected and characterized. This study represents the first expression profiling analysis of D. caryophyllus under heat stress treatments. Numerous genes were found to be induced in response to HS, the study of which may advance our understanding of heat response of carnation." @default.
• W1498278052 created "2016-06-24" @default.
• W1498278052 creator A5006538799 @default.
• W1498278052 creator A5024978855 @default.
• W1498278052 creator A5029818269 @default.
• W1498278052 creator A5062238321 @default.
• W1498278052 creator A5078383280 @default.
• W1498278052 creator A5085717639 @default.
• W1498278052 date "2015-07-14" @default.
• W1498278052 modified "2023-09-28" @default.
• W1498278052 title "Identification of heat-responsive genes in carnation (Dianthus caryophyllus L.) by RNA-seq" @default.
• W1498278052 cites W1524650834 @default.
• W1498278052 cites W1564588886 @default.
• W1498278052 cites W1758346230 @default.
• W1498278052 cites W1941634103 @default.
• W1498278052 cites W1947441265 @default.
• W1498278052 cites W1964294261 @default.
• W1498278052 cites W1966979325 @default.
• W1498278052 cites W1969396288 @default.
• W1498278052 cites W1980903536 @default.
• W1498278052 cites W1982724915 @default.
• W1498278052 cites W1983795465 @default.
• W1498278052 cites W1992310876 @default.
• W1498278052 cites W2004782458 @default.
• W1498278052 cites W2014083300 @default.
• W1498278052 cites W2014341228 @default.
• W1498278052 cites W2020088929 @default.
• W1498278052 cites W2024597739 @default.
• W1498278052 cites W2041743047 @default.
• W1498278052 cites W2043336502 @default.
• W1498278052 cites W2044652733 @default.
• W1498278052 cites W2056554121 @default.
• W1498278052 cites W2059410642 @default.
• W1498278052 cites W2061611566 @default.
• W1498278052 cites W2062041233 @default.
• W1498278052 cites W2069083282 @default.
• W1498278052 cites W2072008344 @default.
• W1498278052 cites W2074271378 @default.
• W1498278052 cites W2074571850 @default.
• W1498278052 cites W2077394023 @default.
• W1498278052 cites W2079008625 @default.
• W1498278052 cites W2082658784 @default.
• W1498278052 cites W2091535931 @default.
• W1498278052 cites W2092035883 @default.
• W1498278052 cites W2097961562 @default.
• W1498278052 cites W2100305481 @default.
• W1498278052 cites W2103650142 @default.
• W1498278052 cites W2104241657 @default.
• W1498278052 cites W2111157010 @default.
• W1498278052 cites W2113656539 @default.
• W1498278052 cites W2114587202 @default.
• W1498278052 cites W2118516570 @default.
• W1498278052 cites W2119999468 @default.
• W1498278052 cites W2121013826 @default.
• W1498278052 cites W2121501444 @default.
• W1498278052 cites W2122659041 @default.
• W1498278052 cites W2124459618 @default.
• W1498278052 cites W2126419817 @default.
• W1498278052 cites W2126630551 @default.
• W1498278052 cites W2127697129 @default.
• W1498278052 cites W2128224069 @default.
• W1498278052 cites W2132354673 @default.
• W1498278052 cites W2133408621 @default.
• W1498278052 cites W2136145671 @default.
• W1498278052 cites W2136195840 @default.
• W1498278052 cites W2136249240 @default.
• W1498278052 cites W2140791476 @default.
• W1498278052 cites W2145363894 @default.
• W1498278052 cites W2146516445 @default.
• W1498278052 cites W2151081606 @default.
• W1498278052 cites W2154431984 @default.
• W1498278052 cites W2156822166 @default.
• W1498278052 cites W2159230527 @default.
• W1498278052 cites W2159482845 @default.
• W1498278052 cites W2160586768 @default.
• W1498278052 cites W2164751861 @default.
• W1498278052 cites W2165463056 @default.
• W1498278052 cites W2167298549 @default.
• W1498278052 cites W2170438779 @default.
• W1498278052 cites W2185573413 @default.
• W1498278052 doi "https://doi.org/10.3389/fpls.2015.00519" @default.
• W1498278052 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4500917" @default.
• W1498278052 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/26236320" @default.
• W1498278052 hasPublicationYear "2015" @default.
• W1498278052 type Work @default.
• W1498278052 sameAs 1498278052 @default.
• W1498278052 citedByCount "25" @default.
• W1498278052 countsByYear W14982780522016 @default.
• W1498278052 countsByYear W14982780522017 @default.
• W1498278052 countsByYear W14982780522018 @default.
• W1498278052 countsByYear W14982780522019 @default.
• W1498278052 countsByYear W14982780522020 @default.
• W1498278052 countsByYear W14982780522022 @default.
• W1498278052 countsByYear W14982780522023 @default.
• W1498278052 crossrefType "journal-article" @default.
• W1498278052 hasAuthorship W1498278052A5006538799 @default.
• W1498278052 hasAuthorship W1498278052A5024978855 @default.
• W1498278052 hasAuthorship W1498278052A5029818269 @default.
• W1498278052 hasAuthorship W1498278052A5062238321 @default.
• W1498278052 hasAuthorship W1498278052A5078383280 @default.

• next