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• W1520430035 endingPage "e0132051" @default.
• W1520430035 startingPage "e0132051" @default.
• W1520430035 abstract "Mitogen-activated protein kinase (MAPK) cascades are fundamental signal transduction modules in plants, controlling cell division, development, hormone signaling, and biotic and abiotic stress responses. Although MAPKs have been investigated in several plant species, a comprehensive analysis of the MAPK gene family has hitherto not been performed in Brassica rapa. In this study, we identified 32 MAPKs in the B. rapa genome by conducting BLASTP and syntenic block analyses, and screening for the essential signature motif (TDY or TEY) of plant MAPK proteins. Of the 32 BraMAPK genes retrieved from the Brassica Database, 13 exhibited exon splicing errors, excessive splicing of the 5' sequence, excessive retention of the 5' sequence, and sequencing errors of the 3' end. Phylogenetic trees of the 32 corrected MAPKs from B. rapa and of MAPKs from other plants generated by the neighbor-joining and maximum likelihood methods suggested that BraMAPKs could be divided into four groups (groups A, B, C, and D). Gene number expansion was observed for BraMAPK genes in groups A and D, which may have been caused by the tandem duplication and genome triplication of the ancestral genome of the Brassica progenitor. Except for five members of the BraMAPK10 subfamily, the identified BraMAPKs were expressed in most of the tissues examined, including callus, root, stem, leaf, flower, and silique. Quantitative real-time PCR demonstrated that at least six and five BraMAPKs were induced or repressed by various abiotic stresses and hormone treatments, respectively, suggesting their potential roles in the abiotic stress response and various hormone signal transduction pathways in B. rapa. This study provides valuable insight into the putative physiological and biochemical functions of MAPK genes in B. rapa." @default.
• W1520430035 created "2016-06-24" @default.
• W1520430035 creator A5001873146 @default.
• W1520430035 creator A5014545352 @default.
• W1520430035 creator A5018849320 @default.
• W1520430035 creator A5033820952 @default.
• W1520430035 creator A5036288146 @default.
• W1520430035 creator A5044810789 @default.
• W1520430035 creator A5064941682 @default.
• W1520430035 creator A5067860520 @default.
• W1520430035 creator A5067987542 @default.
• W1520430035 date "2015-07-14" @default.
• W1520430035 modified "2023-10-09" @default.
• W1520430035 title "Genome-Wide Survey and Expression Profile Analysis of the Mitogen-Activated Protein Kinase (MAPK) Gene Family in Brassica rapa" @default.
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