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• W1554777263 abstract "A repeat in a string is a substring that occurs more than once. A repeat is extendible if every occurrence of the repeat has an identical letter either on the left or on the right; otherwise, it is maximal. A multirepeat is a repeat that occurs at least mmin times (m$_{min}$g 2) in each of at least q g 1 strings in a given set of strings. In this paper, we describe a family of efficient algorithms based on suffix arrays to compute maximal multirepeats under various constraints. Our algorithms are faster, more flexible and much more space-efficient than algorithms recently proposed for this problem. The results extend recent work by two of the authors computing all maximal repeats in a single string." @default.
• W1554777263 created "2016-06-24" @default.
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• W1554777263 date "2009-01-01" @default.
• W1554777263 modified "2023-09-26" @default.
• W1554777263 title "Faster Algorithms for Computing Maximal Multirepeats in Multiple Sequences" @default.
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• W1554777263 doi "https://doi.org/10.3233/fi-2009-203" @default.
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