FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W1568998429> ?p ?o ?g. }

• W1568998429 endingPage "4795" @default.
• W1568998429 startingPage "4786" @default.
• W1568998429 abstract "DNA-binding sites for SYCRP1, which is a regulatory protein of the cyanobacterium Synechocystis sp. PCC6803, were predicted for the whole genome sequence by estimating changes in the binding free energy () for SYCRP1 for those sites. The values were calculated by summing ΔΔG values derived from systematic single base-pair substitution experiments (symmetrical and cooperative binding model). Of the calculated binding sites, 23 sites with a value < 3.9 kcal·mol−1 located upstream or between the ORFs were selected as putative binding sites for SYCRP1. In order to confirm whether SYCRP1 actually binds to these binding sites or not, 11 sites with the lowest values were tested experimentally, and we confirmed that SYCRP1 binds to ten of the 11 sites with a ΔΔGtotal value < 3.9 kcal·mol−1. The best correlation coefficient between and the observed ΔΔGtotal for binding of SYCRP1 to those sites was 0.78. These results suggest that the ΔΔG values derived from systematic single base-pair experiments may be used to screen for potential binding sites of a regulatory protein in the genome sequence." @default.
• W1568998429 created "2016-06-24" @default.
• W1568998429 creator A5000668720 @default.
• W1568998429 creator A5007226175 @default.
• W1568998429 creator A5016802062 @default.
• W1568998429 creator A5033360131 @default.
• W1568998429 creator A5057568759 @default.
• W1568998429 creator A5066949384 @default.
• W1568998429 date "2008-08-29" @default.
• W1568998429 modified "2023-10-16" @default.
• W1568998429 title "ΔG-based prediction and experimental confirmation of SYCRP1-binding sites on the Synechocystis genome" @default.
• W1568998429 cites W1499866917 @default.
• W1568998429 cites W1536291417 @default.
• W1568998429 cites W1986748430 @default.
• W1568998429 cites W1989768094 @default.
• W1568998429 cites W1998146102 @default.
• W1568998429 cites W2004116582 @default.
• W1568998429 cites W2005986251 @default.
• W1568998429 cites W2018507982 @default.
• W1568998429 cites W2021440626 @default.
• W1568998429 cites W2032548898 @default.
• W1568998429 cites W2037099334 @default.
• W1568998429 cites W2042303986 @default.
• W1568998429 cites W2056891274 @default.
• W1568998429 cites W2071753700 @default.
• W1568998429 cites W2074380892 @default.
• W1568998429 cites W2075027571 @default.
• W1568998429 cites W2081346782 @default.
• W1568998429 cites W2087887622 @default.
• W1568998429 cites W2102397936 @default.
• W1568998429 cites W2108141290 @default.
• W1568998429 cites W2108190672 @default.
• W1568998429 cites W2117285581 @default.
• W1568998429 cites W2117390743 @default.
• W1568998429 cites W2146393977 @default.
• W1568998429 cites W2150301908 @default.
• W1568998429 cites W2152664145 @default.
• W1568998429 cites W2166277117 @default.
• W1568998429 cites W2171878324 @default.
• W1568998429 doi "https://doi.org/10.1111/j.1742-4658.2008.06618.x" @default.
• W1568998429 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/18761670" @default.
• W1568998429 hasPublicationYear "2008" @default.
• W1568998429 type Work @default.
• W1568998429 sameAs 1568998429 @default.
• W1568998429 citedByCount "10" @default.
• W1568998429 countsByYear W15689984292014 @default.
• W1568998429 countsByYear W15689984292016 @default.
• W1568998429 countsByYear W15689984292018 @default.
• W1568998429 countsByYear W15689984292021 @default.
• W1568998429 countsByYear W15689984292023 @default.
• W1568998429 crossrefType "journal-article" @default.
• W1568998429 hasAuthorship W1568998429A5000668720 @default.
• W1568998429 hasAuthorship W1568998429A5007226175 @default.
• W1568998429 hasAuthorship W1568998429A5016802062 @default.
• W1568998429 hasAuthorship W1568998429A5033360131 @default.
• W1568998429 hasAuthorship W1568998429A5057568759 @default.
• W1568998429 hasAuthorship W1568998429A5066949384 @default.
• W1568998429 hasBestOaLocation W15689984291 @default.
• W1568998429 hasConcept C101762097 @default.
• W1568998429 hasConcept C104317684 @default.
• W1568998429 hasConcept C107824862 @default.
• W1568998429 hasConcept C121332964 @default.
• W1568998429 hasConcept C141231307 @default.
• W1568998429 hasConcept C150194340 @default.
• W1568998429 hasConcept C167625842 @default.
• W1568998429 hasConcept C185544564 @default.
• W1568998429 hasConcept C185581394 @default.
• W1568998429 hasConcept C2780530800 @default.
• W1568998429 hasConcept C3662595 @default.
• W1568998429 hasConcept C47289529 @default.
• W1568998429 hasConcept C54355233 @default.
• W1568998429 hasConcept C552990157 @default.
• W1568998429 hasConcept C86803240 @default.
• W1568998429 hasConcept C93282013 @default.
• W1568998429 hasConceptScore W1568998429C101762097 @default.
• W1568998429 hasConceptScore W1568998429C104317684 @default.
• W1568998429 hasConceptScore W1568998429C107824862 @default.
• W1568998429 hasConceptScore W1568998429C121332964 @default.
• W1568998429 hasConceptScore W1568998429C141231307 @default.
• W1568998429 hasConceptScore W1568998429C150194340 @default.
• W1568998429 hasConceptScore W1568998429C167625842 @default.
• W1568998429 hasConceptScore W1568998429C185544564 @default.
• W1568998429 hasConceptScore W1568998429C185581394 @default.
• W1568998429 hasConceptScore W1568998429C2780530800 @default.
• W1568998429 hasConceptScore W1568998429C3662595 @default.
• W1568998429 hasConceptScore W1568998429C47289529 @default.
• W1568998429 hasConceptScore W1568998429C54355233 @default.
• W1568998429 hasConceptScore W1568998429C552990157 @default.
• W1568998429 hasConceptScore W1568998429C86803240 @default.
• W1568998429 hasConceptScore W1568998429C93282013 @default.
• W1568998429 hasIssue "19" @default.
• W1568998429 hasLocation W15689984291 @default.
• W1568998429 hasLocation W15689984292 @default.
• W1568998429 hasOpenAccess W1568998429 @default.
• W1568998429 hasPrimaryLocation W15689984291 @default.
• W1568998429 hasRelatedWork W2036927633 @default.
• W1568998429 hasRelatedWork W2067561164 @default.
• W1568998429 hasRelatedWork W2079197459 @default.

• next