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• W1754967630 abstract "Abstract Background Proteases play key roles in plants, maintaining strict protein quality control and degrading specific sets of proteins in response to diverse environmental and developmental stimuli. Similarities and differences between the proteases expressed in different species may give valuable insights into their physiological roles and evolution. Results We have performed a comparative analysis of protease genes in the two sequenced dicot genomes, Arabidopsis thaliana and Populus trichocarpa by using genes coding for proteases in the MEROPS database [1] for Arabidopsis to identify homologous sequences in Populus . A multigene-based phylogenetic analysis was performed. Most protease families were found to be larger in Populus than in Arabidopsis , reflecting recent genome duplication. Detailed studies on e.g. the DegP, Clp, FtsH, Lon, rhomboid and papain-Like protease families showed the pattern of gene family expansion and gene loss was complex. We finally show that different Populus tissues express unique suites of protease genes and that the mRNA levels of different classes of proteases change along a developmental gradient. Conclusion Recent gene family expansion and contractions have made the Arabidopsis and Populus complements of proteases different and this, together with expression patterns, gives indications about the roles of the individual gene products or groups of proteases." @default.
• W1754967630 created "2016-06-24" @default.
• W1754967630 creator A5006339957 @default.
• W1754967630 creator A5016970848 @default.
• W1754967630 creator A5034528790 @default.
• W1754967630 creator A5040823337 @default.
• W1754967630 date "2006-12-01" @default.
• W1754967630 modified "2023-10-09" @default.
• W1754967630 title "Protease gene families in Populus and Arabidopsis" @default.
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• W1754967630 doi "https://doi.org/10.1186/1471-2229-6-30" @default.
• W1754967630 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/1780054" @default.
• W1754967630 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/17181860" @default.
• W1754967630 hasPublicationYear "2006" @default.
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