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- W1770294532 abstract "Background Gut microbiota succession and configuration of the host-microbe axis are important features of post-natal development, but cannot be monitored in stool. Methods Paired samples of lumen contents and mucosa from 5 term, male piglets aged 1-2 days (n=3) and littermates 9-10 days older (n=2) were collected at 3 sites each from the duodenum, jejunum, and ileum, and at 4 sites in the colon. A total of 130 samples from 5 piglets were analyzed and assayed for the 16S rRNA gene using an Illumina MiSeq platform. Results The duodenum, jejunum, and ileum each harbored more species compared to the colon (P<0.05). Clustering analyses suggested that the communities within the colon became less similar to the small intestine with older age. Interestingly, mucosal populations also possessed a rich number of species with respect to lumen samples. We detected species that significantly discriminated the lumen from the mucosa in younger and older piglets (Bonferroni-P<0.05). The majority of these species could be attributed to a single different phyla for each comparison. Lumen (# Species) Mucosa (#Species) Younger Firmicutes (19) Proteobacteria (10) Older Proteobacteria (9) Firmicutes (6) Conclusions Post-natal succession of microbes after 9 days of life has longitudinal and radial components, and showed the greatest diversity in small intestine mucosal regions, even in the youngest piglets. This detailed biogeographical map provides a level of resolution about the location of gut microbiome communities that cannot be obtained in stool." @default.
- W1770294532 created "2016-06-24" @default.
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- W1770294532 date "2015-04-01" @default.
- W1770294532 modified "2023-09-27" @default.
- W1770294532 title "Localization of Gut Microbiota Along Longitudinal and Radial Axes in the Healthy Neonatal Piglet" @default.
- W1770294532 doi "https://doi.org/10.1096/fasebj.29.1_supplement.lb371" @default.
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