Matches in SemOpenAlex for { <https://semopenalex.org/work/W1894150215> ?p ?o ?g. }
Showing items 1 to 99 of
99
with 100 items per page.
- W1894150215 endingPage "GEI.S29821" @default.
- W1894150215 startingPage "GEI.S29821" @default.
- W1894150215 abstract "Conventional rigid docking algorithms have been unsatisfactory in their computational results, largely due to the fact that protein structures are flexible in live environments. In response, we propose to introduce the side-chain flexibility in protein motif into the docking. First, the Morse theory is applied to curvature labeling and surface region growing, for segmentation of the protein surface into smaller patches. Then, the protein is described by an ensemble of conformations that incorporate the flexibility of interface side chains and are sampled using rotamers. Next, a 3D rotation invariant shape descriptor is proposed to deal with the flexible motifs and surface patches; thus, pairwise complementarity matching is needed only between the convex patches of ligand and the concave patches of receptor. The iterative closest point (ICP) algorithm is implemented for geometric alignment of the two 3D protein surface patches. Compared with the fast Fourier transform-based global geometric matching algorithm and other methods, our FlexDock system generates much less false-positive docking results, which benefits identification of the complementary candidates. Our computational experiments show the advantages of the proposed flexible docking algorithm over its counterparts." @default.
- W1894150215 created "2016-06-24" @default.
- W1894150215 creator A5006890334 @default.
- W1894150215 creator A5047851681 @default.
- W1894150215 creator A5052636016 @default.
- W1894150215 creator A5060246595 @default.
- W1894150215 creator A5077492354 @default.
- W1894150215 date "2015-01-01" @default.
- W1894150215 modified "2023-10-18" @default.
- W1894150215 title "Applying Side-chain Flexibility in Motifs for Protein Docking" @default.
- W1894150215 cites W1964167423 @default.
- W1894150215 cites W1980745499 @default.
- W1894150215 cites W1988201431 @default.
- W1894150215 cites W2014744153 @default.
- W1894150215 cites W2017128277 @default.
- W1894150215 cites W2029751764 @default.
- W1894150215 cites W2073911195 @default.
- W1894150215 cites W2099088762 @default.
- W1894150215 cites W2110585060 @default.
- W1894150215 cites W2118542302 @default.
- W1894150215 cites W2142094837 @default.
- W1894150215 cites W2151460035 @default.
- W1894150215 cites W2153255725 @default.
- W1894150215 cites W2158100564 @default.
- W1894150215 cites W2166317516 @default.
- W1894150215 cites W2590203313 @default.
- W1894150215 doi "https://doi.org/10.4137/gei.s29821" @default.
- W1894150215 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4610727" @default.
- W1894150215 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/26508871" @default.
- W1894150215 hasPublicationYear "2015" @default.
- W1894150215 type Work @default.
- W1894150215 sameAs 1894150215 @default.
- W1894150215 citedByCount "4" @default.
- W1894150215 countsByYear W18941502152018 @default.
- W1894150215 countsByYear W18941502152020 @default.
- W1894150215 countsByYear W18941502152021 @default.
- W1894150215 countsByYear W18941502152022 @default.
- W1894150215 crossrefType "journal-article" @default.
- W1894150215 hasAuthorship W1894150215A5006890334 @default.
- W1894150215 hasAuthorship W1894150215A5047851681 @default.
- W1894150215 hasAuthorship W1894150215A5052636016 @default.
- W1894150215 hasAuthorship W1894150215A5060246595 @default.
- W1894150215 hasAuthorship W1894150215A5077492354 @default.
- W1894150215 hasBestOaLocation W18941502152 @default.
- W1894150215 hasConcept C103697762 @default.
- W1894150215 hasConcept C11413529 @default.
- W1894150215 hasConcept C114614502 @default.
- W1894150215 hasConcept C131979681 @default.
- W1894150215 hasConcept C147597530 @default.
- W1894150215 hasConcept C154945302 @default.
- W1894150215 hasConcept C159110408 @default.
- W1894150215 hasConcept C184720557 @default.
- W1894150215 hasConcept C185592680 @default.
- W1894150215 hasConcept C195958017 @default.
- W1894150215 hasConcept C33923547 @default.
- W1894150215 hasConcept C41008148 @default.
- W1894150215 hasConcept C41685203 @default.
- W1894150215 hasConcept C59593255 @default.
- W1894150215 hasConcept C71924100 @default.
- W1894150215 hasConcept C77319485 @default.
- W1894150215 hasConceptScore W1894150215C103697762 @default.
- W1894150215 hasConceptScore W1894150215C11413529 @default.
- W1894150215 hasConceptScore W1894150215C114614502 @default.
- W1894150215 hasConceptScore W1894150215C131979681 @default.
- W1894150215 hasConceptScore W1894150215C147597530 @default.
- W1894150215 hasConceptScore W1894150215C154945302 @default.
- W1894150215 hasConceptScore W1894150215C159110408 @default.
- W1894150215 hasConceptScore W1894150215C184720557 @default.
- W1894150215 hasConceptScore W1894150215C185592680 @default.
- W1894150215 hasConceptScore W1894150215C195958017 @default.
- W1894150215 hasConceptScore W1894150215C33923547 @default.
- W1894150215 hasConceptScore W1894150215C41008148 @default.
- W1894150215 hasConceptScore W1894150215C41685203 @default.
- W1894150215 hasConceptScore W1894150215C59593255 @default.
- W1894150215 hasConceptScore W1894150215C71924100 @default.
- W1894150215 hasConceptScore W1894150215C77319485 @default.
- W1894150215 hasLocation W18941502151 @default.
- W1894150215 hasLocation W18941502152 @default.
- W1894150215 hasLocation W18941502153 @default.
- W1894150215 hasLocation W18941502154 @default.
- W1894150215 hasOpenAccess W1894150215 @default.
- W1894150215 hasPrimaryLocation W18941502151 @default.
- W1894150215 hasRelatedWork W1992786240 @default.
- W1894150215 hasRelatedWork W2037320233 @default.
- W1894150215 hasRelatedWork W2072180710 @default.
- W1894150215 hasRelatedWork W2162967120 @default.
- W1894150215 hasRelatedWork W2301625241 @default.
- W1894150215 hasRelatedWork W2329052364 @default.
- W1894150215 hasRelatedWork W2553094381 @default.
- W1894150215 hasRelatedWork W2794807012 @default.
- W1894150215 hasRelatedWork W3043968438 @default.
- W1894150215 hasRelatedWork W4310018788 @default.
- W1894150215 hasVolume "8" @default.
- W1894150215 isParatext "false" @default.
- W1894150215 isRetracted "false" @default.
- W1894150215 magId "1894150215" @default.
- W1894150215 workType "article" @default.