FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W1897974504> ?p ?o ?g. }

• W1897974504 endingPage "526" @default.
• W1897974504 startingPage "517" @default.
• W1897974504 abstract "Summary Mapping‐by‐sequencing, as implemented in SHOREmap (‘SHOREmapping’), is greatly accelerating the identification of causal mutations. The original SHOREmap approach based on resequencing of bulked segregants required a highly accurate and complete reference sequence. However, current whole‐genome or transcriptome assemblies from next‐generation sequencing data of non‐model organisms do not produce chromosome‐length scaffolds. We have therefore developed a method that exploits synteny with a related genome for genetic mapping. We first demonstrate how mapping‐by‐sequencing can be performed using a reduced number of markers, and how the associated decrease in the number of markers can be compensated for by enrichment of marker sequences. As proof of concept, we apply this method to Arabidopsis thaliana gene models ordered by synteny with the genome sequence of the distant relative Brassica rapa , whose genome has several large‐scale rearrangements relative to A. thaliana . Our approach provides an alternative method for high‐resolution genetic mapping in species that lack finished genome reference sequences or for which only RNA‐seq assemblies are available. Finally, for improved identification of causal mutations by fine‐mapping, we introduce a new likelihood ratio test statistic, transforming local allele frequency estimations into a confidence interval similar to conventional mapping intervals." @default.
• W1897974504 created "2016-06-24" @default.
• W1897974504 creator A5001364197 @default.
• W1897974504 creator A5003440649 @default.
• W1897974504 creator A5007083753 @default.
• W1897974504 creator A5008117650 @default.
• W1897974504 creator A5022917136 @default.
• W1897974504 creator A5044583335 @default.
• W1897974504 creator A5060387083 @default.
• W1897974504 creator A5067982617 @default.
• W1897974504 creator A5080970683 @default.
• W1897974504 date "2012-05-14" @default.
• W1897974504 modified "2023-10-16" @default.
• W1897974504 title "Synteny-based mapping-by-sequencing enabled by targeted enrichment" @default.
• W1897974504 cites W1494075612 @default.
• W1897974504 cites W1572357774 @default.
• W1897974504 cites W1980563628 @default.
• W1897974504 cites W1984637607 @default.
• W1897974504 cites W1996420004 @default.
• W1897974504 cites W1996547052 @default.
• W1897974504 cites W1999102617 @default.
• W1897974504 cites W2003865229 @default.
• W1897974504 cites W2009867049 @default.
• W1897974504 cites W2036620956 @default.
• W1897974504 cites W2037199331 @default.
• W1897974504 cites W2039013541 @default.
• W1897974504 cites W2043621752 @default.
• W1897974504 cites W2044141063 @default.
• W1897974504 cites W2053990388 @default.
• W1897974504 cites W2061091462 @default.
• W1897974504 cites W2062564328 @default.
• W1897974504 cites W2063985242 @default.
• W1897974504 cites W2079790280 @default.
• W1897974504 cites W2083783640 @default.
• W1897974504 cites W2111872969 @default.
• W1897974504 cites W2116122104 @default.
• W1897974504 cites W2119574871 @default.
• W1897974504 cites W2121531763 @default.
• W1897974504 cites W2129264270 @default.
• W1897974504 cites W2140772179 @default.
• W1897974504 cites W2141550398 @default.
• W1897974504 cites W2142124646 @default.
• W1897974504 cites W2159293403 @default.
• W1897974504 cites W2159474015 @default.
• W1897974504 cites W2169773990 @default.
• W1897974504 cites W2171679524 @default.
• W1897974504 cites W2171731553 @default.
• W1897974504 doi "https://doi.org/10.1111/j.1365-313x.2012.04993.x" @default.
• W1897974504 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/22409706" @default.
• W1897974504 hasPublicationYear "2012" @default.
• W1897974504 type Work @default.
• W1897974504 sameAs 1897974504 @default.
• W1897974504 citedByCount "21" @default.
• W1897974504 countsByYear W18979745042013 @default.
• W1897974504 countsByYear W18979745042014 @default.
• W1897974504 countsByYear W18979745042015 @default.
• W1897974504 countsByYear W18979745042016 @default.
• W1897974504 countsByYear W18979745042017 @default.
• W1897974504 countsByYear W18979745042018 @default.
• W1897974504 countsByYear W18979745042019 @default.
• W1897974504 countsByYear W18979745042021 @default.
• W1897974504 countsByYear W18979745042023 @default.
• W1897974504 crossrefType "journal-article" @default.
• W1897974504 hasAuthorship W1897974504A5001364197 @default.
• W1897974504 hasAuthorship W1897974504A5003440649 @default.
• W1897974504 hasAuthorship W1897974504A5007083753 @default.
• W1897974504 hasAuthorship W1897974504A5008117650 @default.
• W1897974504 hasAuthorship W1897974504A5022917136 @default.
• W1897974504 hasAuthorship W1897974504A5044583335 @default.
• W1897974504 hasAuthorship W1897974504A5060387083 @default.
• W1897974504 hasAuthorship W1897974504A5067982617 @default.
• W1897974504 hasAuthorship W1897974504A5080970683 @default.
• W1897974504 hasBestOaLocation W18979745041 @default.
• W1897974504 hasConcept C104317684 @default.
• W1897974504 hasConcept C116834253 @default.
• W1897974504 hasConcept C122735190 @default.
• W1897974504 hasConcept C141231307 @default.
• W1897974504 hasConcept C189206191 @default.
• W1897974504 hasConcept C192953774 @default.
• W1897974504 hasConcept C24432333 @default.
• W1897974504 hasConcept C3020804800 @default.
• W1897974504 hasConcept C30481170 @default.
• W1897974504 hasConcept C53702515 @default.
• W1897974504 hasConcept C54355233 @default.
• W1897974504 hasConcept C59822182 @default.
• W1897974504 hasConcept C70721500 @default.
• W1897974504 hasConcept C84597430 @default.
• W1897974504 hasConcept C86803240 @default.
• W1897974504 hasConceptScore W1897974504C104317684 @default.
• W1897974504 hasConceptScore W1897974504C116834253 @default.
• W1897974504 hasConceptScore W1897974504C122735190 @default.
• W1897974504 hasConceptScore W1897974504C141231307 @default.
• W1897974504 hasConceptScore W1897974504C189206191 @default.
• W1897974504 hasConceptScore W1897974504C192953774 @default.
• W1897974504 hasConceptScore W1897974504C24432333 @default.
• W1897974504 hasConceptScore W1897974504C3020804800 @default.
• W1897974504 hasConceptScore W1897974504C30481170 @default.
• W1897974504 hasConceptScore W1897974504C53702515 @default.

• next