Matches in SemOpenAlex for { <https://semopenalex.org/work/W1973048207> ?p ?o ?g. }
- W1973048207 endingPage "e45739" @default.
- W1973048207 startingPage "e45739" @default.
- W1973048207 abstract "A consensus genetic map of tetraploid cotton was constructed using six high-density maps and after the integration of a sequence-based marker redundancy check. Public cotton SSR libraries (17,343 markers) were curated for sequence redundancy using 90% as a similarity cutoff. As a result, 20% of the markers (3,410) could be considered as redundant with some other markers. The marker redundancy information had been a crucial part of the map integration process, in which the six most informative interspecific Gossypium hirsutum×G. barbadense genetic maps were used for assembling a high density consensus (HDC) map for tetraploid cotton. With redundant markers being removed, the HDC map could be constructed thanks to the sufficient number of collinear non-redundant markers in common between the component maps. The HDC map consists of 8,254 loci, originating from 6,669 markers, and spans 4,070 cM, with an average of 2 loci per cM. The HDC map presents a high rate of locus duplications, as 1,292 markers among the 6,669 were mapped in more than one locus. Two thirds of the duplications are bridging homoeologous A(T) and D(T) chromosomes constitutive of allopolyploid cotton genome, with an average of 64 duplications per A(T)/D(T) chromosome pair. Sequences of 4,744 mapped markers were used for a mutual blast alignment (BBMH) with the 13 major scaffolds of the recently released Gossypium raimondii genome indicating high level of homology between the diploid D genome and the tetraploid cotton genetic map, with only a few minor possible structural rearrangements. Overall, the HDC map will serve as a valuable resource for trait QTL comparative mapping, map-based cloning of important genes, and better understanding of the genome structure and evolution of tetraploid cotton." @default.
- W1973048207 created "2016-06-24" @default.
- W1973048207 creator A5008602522 @default.
- W1973048207 creator A5019120433 @default.
- W1973048207 creator A5040998948 @default.
- W1973048207 creator A5067876448 @default.
- W1973048207 creator A5072258763 @default.
- W1973048207 creator A5089054864 @default.
- W1973048207 date "2012-09-24" @default.
- W1973048207 modified "2023-10-11" @default.
- W1973048207 title "A High Density Consensus Genetic Map of Tetraploid Cotton That Integrates Multiple Component Maps through Molecular Marker Redundancy Check" @default.
- W1973048207 cites W1467148853 @default.
- W1973048207 cites W1873720074 @default.
- W1973048207 cites W1874557030 @default.
- W1973048207 cites W1963794233 @default.
- W1973048207 cites W1967014401 @default.
- W1973048207 cites W1971766765 @default.
- W1973048207 cites W1971936537 @default.
- W1973048207 cites W1973652210 @default.
- W1973048207 cites W1975063965 @default.
- W1973048207 cites W1980254988 @default.
- W1973048207 cites W1986072793 @default.
- W1973048207 cites W1989768495 @default.
- W1973048207 cites W1991515433 @default.
- W1973048207 cites W1994073284 @default.
- W1973048207 cites W1996451086 @default.
- W1973048207 cites W2001869199 @default.
- W1973048207 cites W2002889374 @default.
- W1973048207 cites W2009329677 @default.
- W1973048207 cites W2013762844 @default.
- W1973048207 cites W2014005472 @default.
- W1973048207 cites W2023042688 @default.
- W1973048207 cites W2025659481 @default.
- W1973048207 cites W2026044797 @default.
- W1973048207 cites W2051352935 @default.
- W1973048207 cites W2051808627 @default.
- W1973048207 cites W2058355586 @default.
- W1973048207 cites W2070406713 @default.
- W1973048207 cites W2071950723 @default.
- W1973048207 cites W2072728052 @default.
- W1973048207 cites W2077015541 @default.
- W1973048207 cites W2087064593 @default.
- W1973048207 cites W2087066139 @default.
- W1973048207 cites W2090426511 @default.
- W1973048207 cites W2097347619 @default.
- W1973048207 cites W2097816769 @default.
- W1973048207 cites W2104493641 @default.
- W1973048207 cites W2104856348 @default.
- W1973048207 cites W2106096973 @default.
- W1973048207 cites W2109891657 @default.
- W1973048207 cites W2112653577 @default.
- W1973048207 cites W2112849442 @default.
- W1973048207 cites W2114479612 @default.
- W1973048207 cites W2119288174 @default.
- W1973048207 cites W2142178963 @default.
- W1973048207 cites W2155659261 @default.
- W1973048207 cites W2161108830 @default.
- W1973048207 cites W2170613743 @default.
- W1973048207 cites W2171125110 @default.
- W1973048207 cites W2259386306 @default.
- W1973048207 cites W2329736732 @default.
- W1973048207 cites W930230136 @default.
- W1973048207 doi "https://doi.org/10.1371/journal.pone.0045739" @default.
- W1973048207 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3899042" @default.
- W1973048207 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/23029214" @default.
- W1973048207 hasPublicationYear "2012" @default.
- W1973048207 type Work @default.
- W1973048207 sameAs 1973048207 @default.
- W1973048207 citedByCount "89" @default.
- W1973048207 countsByYear W19730482072013 @default.
- W1973048207 countsByYear W19730482072014 @default.
- W1973048207 countsByYear W19730482072015 @default.
- W1973048207 countsByYear W19730482072016 @default.
- W1973048207 countsByYear W19730482072017 @default.
- W1973048207 countsByYear W19730482072018 @default.
- W1973048207 countsByYear W19730482072019 @default.
- W1973048207 countsByYear W19730482072020 @default.
- W1973048207 countsByYear W19730482072021 @default.
- W1973048207 countsByYear W19730482072022 @default.
- W1973048207 countsByYear W19730482072023 @default.
- W1973048207 crossrefType "journal-article" @default.
- W1973048207 hasAuthorship W1973048207A5008602522 @default.
- W1973048207 hasAuthorship W1973048207A5019120433 @default.
- W1973048207 hasAuthorship W1973048207A5040998948 @default.
- W1973048207 hasAuthorship W1973048207A5067876448 @default.
- W1973048207 hasAuthorship W1973048207A5072258763 @default.
- W1973048207 hasAuthorship W1973048207A5089054864 @default.
- W1973048207 hasBestOaLocation W19730482071 @default.
- W1973048207 hasConcept C104317684 @default.
- W1973048207 hasConcept C111919701 @default.
- W1973048207 hasConcept C122735190 @default.
- W1973048207 hasConcept C141231307 @default.
- W1973048207 hasConcept C143191323 @default.
- W1973048207 hasConcept C152124472 @default.
- W1973048207 hasConcept C190789776 @default.
- W1973048207 hasConcept C2776552463 @default.
- W1973048207 hasConcept C2991886518 @default.
- W1973048207 hasConcept C30481170 @default.