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• W1975542665 endingPage "14778" @default.
• W1975542665 startingPage "14769" @default.
• W1975542665 abstract "Ultraviolet resonance Raman (UVRR) spectra of tryptophan compounds in various solvents and a model peptide are presented and reveal systematic changes that reflect solvent polarity, hydrogen bond strength, and cation−π interaction. The commonly utilized UVRR spectral marker for environment polarity that has been based on off-resonance Raman data, the tryptophan Fermi doublet ratio I∼1360/I∼1340, exhibits different values in on- and off-resonance Raman spectra as well as for different tryptophan derivatives. Specifically, the UVRR Fermi doublet ratio for indole ranges from 0.3 in polar solvents to 0.8 in nonpolar solvents, whereas the respective values reported here and previously for off-resonance Raman spectra are 0.5−1.3. UVRR Fermi doublet ratios for the more biologically relevant molecule, N-acetyl tryptophan ethyl ester (NATEE), are in a smaller range of 1.1 (polar solvent) to 1.7 (nonpolar solvent) and correlate to the solvent polarity/polarization parameters π* and ETN. As has been reported previously, several UVRR modes are also sensitive to the hydrogen bond strength of the indole N−H moiety. Here, we report a new unambiguous marker for H-bonding: the ratio of the W10 (∼1237 cm−1) intensity to that of the W9 (∼1254 cm−1) mode (RW10). This ratio is 0.7 for NATEE in the absence of hydrogen bond acceptors and increases to 3.1 in the presence of strong hydrogen bond acceptors, with a value of 2.3 in water. The W8 and W17 modes shift more than +10 and approximately −5 cm−1 upon increase in hydrogen bond strength; this range for W17 is smaller than that reported previously and reflects a more realistic range for proteins and peptides in solution. Finally, our data provide evidence for change in the W18 and W16 relative intensity in the presence of cation−π interactions. These UVRR markers are utilized to interpret spectra of model membrane-bound systems tryptophan octyl ester and the peptide toxin melittin. These spectra reveal the importance of intra- and intermolecular hydrogen bonding and cation−π interactions that likely influence the partitioning of membrane-associated biomolecules to lipid bilayers or self-associated soluble oligomers. The UVRR analysis presented here modifies and augments prior reports and provides an unambiguous set of spectral makers that can be applied to elucidate the molecular microenvironment and structure of a wide range of complex systems, including anchoring tryptophan residues in membrane proteins and peptides." @default.
• W1975542665 created "2016-06-24" @default.
• W1975542665 creator A5005128372 @default.
• W1975542665 creator A5018916887 @default.
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• W1975542665 date "2009-10-09" @default.
• W1975542665 modified "2023-09-27" @default.
• W1975542665 title "Hydrogen Bonding and Solvent Polarity Markers in the UV Resonance Raman Spectrum of Tryptophan: Application to Membrane Proteins" @default.
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• W1975542665 doi "https://doi.org/10.1021/jp905473y" @default.
• W1975542665 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/2836804" @default.
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