FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W1978175357> ?p ?o ?g. }

• W1978175357 endingPage "59" @default.
• W1978175357 startingPage "53" @default.
• W1978175357 abstract "DFT studies of desoxydinucleoside monophosphate complexes with Na-ions (dDMPs), using DGAUSS and ADF software reveal that the characteristic B-type conformation of DNA duplexes is initially predisposed in single strand in the form of a local minimum. Such predisposition may be important for biological functioning of DNA by facilitating an addition of new nucleotide in the processes of DNA duplication and restoration of double helix after unwinding. The computational results demonstrate the important contribution of intra-strand interactions to conformational stability and sequence-dependent variability of B-DNA duplexes. The main characteristics of the “canonical” BI conformations, such as the regions of torsion angles of sugar-phosphate backbone, C2′-endo or very close to C2′-endo sugar puckerings, and nearly parallel base-ring arrangements are already present in the single strand and are universal for all 16 dDMPs. The dihedral angle between the bases does not depend on the extent of their overlap, which suggests the major contribution of sugar-phosphate backbone to formation of these minima. The study reveals characteristic sequence dependence of the base arrangements. Namely, an extensive base-ring overlap takes place for all purine–purine and purine–pyrimidine sequences, and negligible ring overlap is observed in all pyrimidine–purine and pyrimidine–pyrimidine sequences. These arrangements closely resemble the geometrical characteristics of BI DNA in duplex crystals. Preliminary results of search for other energy minima related to helical DNA structures revealed the existence of BII-like minima for some dDMPs." @default.
• W1978175357 created "2016-06-24" @default.
• W1978175357 creator A5015704164 @default.
• W1978175357 creator A5030464399 @default.
• W1978175357 creator A5033145927 @default.
• W1978175357 creator A5035003555 @default.
• W1978175357 creator A5036276298 @default.
• W1978175357 creator A5041986754 @default.
• W1978175357 creator A5047708751 @default.
• W1978175357 creator A5053492164 @default.
• W1978175357 creator A5056605776 @default.
• W1978175357 creator A5074550385 @default.
• W1978175357 date "2009-10-01" @default.
• W1978175357 modified "2023-10-17" @default.
• W1978175357 title "DFT study of minimal fragments of nucleic acid single chain for explication of sequence dependence of DNA duplex conformation" @default.
• W1978175357 cites W1970099587 @default.
• W1978175357 cites W1978958540 @default.
• W1978175357 cites W1988327247 @default.
• W1978175357 cites W1990277472 @default.
• W1978175357 cites W2003122343 @default.
• W1978175357 cites W2010375703 @default.
• W1978175357 cites W2018677707 @default.
• W1978175357 cites W2022889126 @default.
• W1978175357 cites W2022950330 @default.
• W1978175357 cites W2039035988 @default.
• W1978175357 cites W2039117441 @default.
• W1978175357 cites W2045481371 @default.
• W1978175357 cites W2049079467 @default.
• W1978175357 cites W2061822610 @default.
• W1978175357 cites W2065919066 @default.
• W1978175357 cites W2078248271 @default.
• W1978175357 cites W2080945020 @default.
• W1978175357 cites W2091643064 @default.
• W1978175357 cites W2094642658 @default.
• W1978175357 cites W2119013389 @default.
• W1978175357 cites W2135542964 @default.
• W1978175357 cites W2139544554 @default.
• W1978175357 cites W2143981217 @default.
• W1978175357 cites W2150345533 @default.
• W1978175357 cites W2150945052 @default.
• W1978175357 cites W2161596131 @default.
• W1978175357 cites W2201172704 @default.
• W1978175357 cites W2952267119 @default.
• W1978175357 cites W4229591424 @default.
• W1978175357 cites W4254723920 @default.
• W1978175357 doi "https://doi.org/10.1016/j.theochem.2009.03.022" @default.
• W1978175357 hasPublicationYear "2009" @default.
• W1978175357 type Work @default.
• W1978175357 sameAs 1978175357 @default.
• W1978175357 citedByCount "13" @default.
• W1978175357 countsByYear W19781753572012 @default.
• W1978175357 countsByYear W19781753572014 @default.
• W1978175357 countsByYear W19781753572016 @default.
• W1978175357 countsByYear W19781753572018 @default.
• W1978175357 countsByYear W19781753572020 @default.
• W1978175357 crossrefType "journal-article" @default.
• W1978175357 hasAuthorship W1978175357A5015704164 @default.
• W1978175357 hasAuthorship W1978175357A5030464399 @default.
• W1978175357 hasAuthorship W1978175357A5033145927 @default.
• W1978175357 hasAuthorship W1978175357A5035003555 @default.
• W1978175357 hasAuthorship W1978175357A5036276298 @default.
• W1978175357 hasAuthorship W1978175357A5041986754 @default.
• W1978175357 hasAuthorship W1978175357A5047708751 @default.
• W1978175357 hasAuthorship W1978175357A5053492164 @default.
• W1978175357 hasAuthorship W1978175357A5056605776 @default.
• W1978175357 hasAuthorship W1978175357A5074550385 @default.
• W1978175357 hasConcept C104317684 @default.
• W1978175357 hasConcept C112887158 @default.
• W1978175357 hasConcept C178790620 @default.
• W1978175357 hasConcept C185581394 @default.
• W1978175357 hasConcept C185592680 @default.
• W1978175357 hasConcept C24107716 @default.
• W1978175357 hasConcept C2778112365 @default.
• W1978175357 hasConcept C2779321679 @default.
• W1978175357 hasConcept C32909587 @default.
• W1978175357 hasConcept C512185932 @default.
• W1978175357 hasConcept C552990157 @default.
• W1978175357 hasConcept C55493867 @default.
• W1978175357 hasConcept C71240020 @default.
• W1978175357 hasConcept C8010536 @default.
• W1978175357 hasConcept C89025888 @default.
• W1978175357 hasConcept C99611785 @default.
• W1978175357 hasConceptScore W1978175357C104317684 @default.
• W1978175357 hasConceptScore W1978175357C112887158 @default.
• W1978175357 hasConceptScore W1978175357C178790620 @default.
• W1978175357 hasConceptScore W1978175357C185581394 @default.
• W1978175357 hasConceptScore W1978175357C185592680 @default.
• W1978175357 hasConceptScore W1978175357C24107716 @default.
• W1978175357 hasConceptScore W1978175357C2778112365 @default.
• W1978175357 hasConceptScore W1978175357C2779321679 @default.
• W1978175357 hasConceptScore W1978175357C32909587 @default.
• W1978175357 hasConceptScore W1978175357C512185932 @default.
• W1978175357 hasConceptScore W1978175357C552990157 @default.
• W1978175357 hasConceptScore W1978175357C55493867 @default.
• W1978175357 hasConceptScore W1978175357C71240020 @default.
• W1978175357 hasConceptScore W1978175357C8010536 @default.
• W1978175357 hasConceptScore W1978175357C89025888 @default.
• W1978175357 hasConceptScore W1978175357C99611785 @default.

• next