FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W1978673410> ?p ?o ?g. }

• W1978673410 endingPage "e88998" @default.
• W1978673410 startingPage "e88998" @default.
• W1978673410 abstract "Pomegranate is a valuable crop that is grown commercially in many parts of the world. Wild species have been reported from India, Turkmenistan and Socotra. Pomegranate fruit has a variety of health-beneficial qualities. However, despite this crop's importance, only moderate effort has been invested in studying its biochemical or physiological properties or in establishing genomic and genetic infrastructures. In this study, we reconstructed a transcriptome from two phenotypically different accessions using 454-GS-FLX Titanium technology. These data were used to explore the functional annotation of 45,187 fully annotated contigs. We further compiled a genetic-variation resource of 7,155 simple-sequence repeats (SSRs) and 6,500 single-nucleotide polymorphisms (SNPs). A subset of 480 SNPs was sampled to investigate the genetic structure of the broad pomegranate germplasm collection at the Agricultural Research Organization (ARO), which includes accessions from different geographical areas worldwide. This subset of SNPs was found to be polymorphic, with 10.7% loci with minor allele frequencies of (MAF<0.05). These SNPs were successfully used to classify the ARO pomegranate collection into two major groups of accessions: one from India, China and Iran, composed of mainly unknown country origin and which was more of an admixture than the other major group, composed of accessions mainly from the Mediterranean basin, Central Asia and California. This study establishes a high-throughput transcriptome and genetic-marker infrastructure. Moreover, it sheds new light on the genetic interrelations between pomegranate species worldwide and more accurately defines their genetic nature." @default.
• W1978673410 created "2016-06-24" @default.
• W1978673410 creator A5002567913 @default.
• W1978673410 creator A5030288873 @default.
• W1978673410 creator A5030667706 @default.
• W1978673410 creator A5033997561 @default.
• W1978673410 creator A5034065740 @default.
• W1978673410 creator A5054099084 @default.
• W1978673410 creator A5069958252 @default.
• W1978673410 creator A5071481959 @default.
• W1978673410 date "2014-02-18" @default.
• W1978673410 modified "2023-10-09" @default.
• W1978673410 title "Single-Nucleotide Polymorphism Markers from De-Novo Assembly of the Pomegranate Transcriptome Reveal Germplasm Genetic Diversity" @default.
• W1978673410 cites W1547172494 @default.
• W1978673410 cites W1568479515 @default.
• W1978673410 cites W1856892604 @default.
• W1978673410 cites W1914148979 @default.
• W1978673410 cites W1967795232 @default.
• W1978673410 cites W1974116356 @default.
• W1978673410 cites W1974136109 @default.
• W1978673410 cites W1979182199 @default.
• W1978673410 cites W1980440593 @default.
• W1978673410 cites W1981270312 @default.
• W1978673410 cites W1981509058 @default.
• W1978673410 cites W1982379208 @default.
• W1978673410 cites W1987454767 @default.
• W1978673410 cites W1989214197 @default.
• W1978673410 cites W1991001966 @default.
• W1978673410 cites W1994779860 @default.
• W1978673410 cites W1996423252 @default.
• W1978673410 cites W2005401340 @default.
• W1978673410 cites W2005458361 @default.
• W1978673410 cites W2014775410 @default.
• W1978673410 cites W2016310579 @default.
• W1978673410 cites W2019249381 @default.
• W1978673410 cites W2023468002 @default.
• W1978673410 cites W2024424777 @default.
• W1978673410 cites W2039053863 @default.
• W1978673410 cites W2039615896 @default.
• W1978673410 cites W2055127034 @default.
• W1978673410 cites W2056516521 @default.
• W1978673410 cites W2059082008 @default.
• W1978673410 cites W2064175068 @default.
• W1978673410 cites W2066358615 @default.
• W1978673410 cites W2067795193 @default.
• W1978673410 cites W2068564406 @default.
• W1978673410 cites W2068572885 @default.
• W1978673410 cites W2069036039 @default.
• W1978673410 cites W2070287693 @default.
• W1978673410 cites W2072652027 @default.
• W1978673410 cites W2074312266 @default.
• W1978673410 cites W2075015920 @default.
• W1978673410 cites W2077558439 @default.
• W1978673410 cites W2080392891 @default.
• W1978673410 cites W2083465114 @default.
• W1978673410 cites W2087383314 @default.
• W1978673410 cites W2089537100 @default.
• W1978673410 cites W2092393478 @default.
• W1978673410 cites W2098126593 @default.
• W1978673410 cites W2104490946 @default.
• W1978673410 cites W2111906776 @default.
• W1978673410 cites W2113440473 @default.
• W1978673410 cites W2114475493 @default.
• W1978673410 cites W2120457919 @default.
• W1978673410 cites W2121016876 @default.
• W1978673410 cites W2125543453 @default.
• W1978673410 cites W2130300124 @default.
• W1978673410 cites W2131016694 @default.
• W1978673410 cites W2132917403 @default.
• W1978673410 cites W2134638008 @default.
• W1978673410 cites W2134893844 @default.
• W1978673410 cites W2140976210 @default.
• W1978673410 cites W2141292707 @default.
• W1978673410 cites W2142317953 @default.
• W1978673410 cites W2143674927 @default.
• W1978673410 cites W2144539150 @default.
• W1978673410 cites W2147643078 @default.
• W1978673410 cites W2148590655 @default.
• W1978673410 cites W2150641734 @default.
• W1978673410 cites W2151409320 @default.
• W1978673410 cites W2155390244 @default.
• W1978673410 cites W2160276176 @default.
• W1978673410 cites W2161098702 @default.
• W1978673410 cites W2161339576 @default.
• W1978673410 cites W2162263973 @default.
• W1978673410 cites W2164154943 @default.
• W1978673410 cites W2166807191 @default.
• W1978673410 cites W2168900882 @default.
• W1978673410 cites W2170190097 @default.
• W1978673410 cites W2312519283 @default.
• W1978673410 cites W2331141909 @default.
• W1978673410 cites W2331495949 @default.
• W1978673410 cites W2422198796 @default.
• W1978673410 cites W2468407498 @default.
• W1978673410 cites W2590192693 @default.
• W1978673410 doi "https://doi.org/10.1371/journal.pone.0088998" @default.
• W1978673410 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3928336" @default.
• W1978673410 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24558460" @default.

• next