Matches in SemOpenAlex for { <https://semopenalex.org/work/W1991458239> ?p ?o ?g. }
Showing items 1 to 77 of
77
with 100 items per page.
- W1991458239 abstract "The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder, but critical when sequence databases are incomplete or not available. In this paper we build upon earlier work due to Dancik et al., and Chen et al. to provide a dynamic programming algorithm for interpreting de novo spectra. Our method can handle most of the commonly occurring ions, including a; b; y, and their neutral losses. Additionally, we shift the emphasis away from sequencing to assigning ion types to peaks. In particular, we introduce the notion of core interpretations, which allow us to give confidence values to individual peak assignments, even in the absence of a strong interpretation. Finally, we introduce a systematic approach to evaluating de novo algorithms as a function of spectral quality. We show that our algorithm, in particular the core-interpretation, is robust in the presence of measurement error, and low fragmentation probability." @default.
- W1991458239 created "2016-06-24" @default.
- W1991458239 creator A5007558979 @default.
- W1991458239 creator A5072196170 @default.
- W1991458239 date "2003-04-10" @default.
- W1991458239 modified "2023-10-17" @default.
- W1991458239 title "On <i>de novo</i> interpretation of tandem mass spectra for peptide identification" @default.
- W1991458239 cites W1490430289 @default.
- W1991458239 cites W1994985444 @default.
- W1991458239 cites W1995693931 @default.
- W1991458239 cites W2001848433 @default.
- W1991458239 cites W2020275421 @default.
- W1991458239 cites W2026465178 @default.
- W1991458239 cites W2029195137 @default.
- W1991458239 cites W2058135122 @default.
- W1991458239 cites W2083911564 @default.
- W1991458239 cites W2095013942 @default.
- W1991458239 cites W2077776574 @default.
- W1991458239 doi "https://doi.org/10.1145/640075.640077" @default.
- W1991458239 hasPublicationYear "2003" @default.
- W1991458239 type Work @default.
- W1991458239 sameAs 1991458239 @default.
- W1991458239 citedByCount "42" @default.
- W1991458239 countsByYear W19914582392012 @default.
- W1991458239 countsByYear W19914582392015 @default.
- W1991458239 countsByYear W19914582392016 @default.
- W1991458239 countsByYear W19914582392017 @default.
- W1991458239 countsByYear W19914582392018 @default.
- W1991458239 countsByYear W19914582392019 @default.
- W1991458239 crossrefType "proceedings-article" @default.
- W1991458239 hasAuthorship W1991458239A5007558979 @default.
- W1991458239 hasAuthorship W1991458239A5072196170 @default.
- W1991458239 hasBestOaLocation W19914582392 @default.
- W1991458239 hasConcept C111919701 @default.
- W1991458239 hasConcept C11413529 @default.
- W1991458239 hasConcept C159985019 @default.
- W1991458239 hasConcept C162356407 @default.
- W1991458239 hasConcept C185592680 @default.
- W1991458239 hasConcept C191015642 @default.
- W1991458239 hasConcept C192562407 @default.
- W1991458239 hasConcept C199360897 @default.
- W1991458239 hasConcept C2777814067 @default.
- W1991458239 hasConcept C31827203 @default.
- W1991458239 hasConcept C41008148 @default.
- W1991458239 hasConcept C43617362 @default.
- W1991458239 hasConcept C527412718 @default.
- W1991458239 hasConceptScore W1991458239C111919701 @default.
- W1991458239 hasConceptScore W1991458239C11413529 @default.
- W1991458239 hasConceptScore W1991458239C159985019 @default.
- W1991458239 hasConceptScore W1991458239C162356407 @default.
- W1991458239 hasConceptScore W1991458239C185592680 @default.
- W1991458239 hasConceptScore W1991458239C191015642 @default.
- W1991458239 hasConceptScore W1991458239C192562407 @default.
- W1991458239 hasConceptScore W1991458239C199360897 @default.
- W1991458239 hasConceptScore W1991458239C2777814067 @default.
- W1991458239 hasConceptScore W1991458239C31827203 @default.
- W1991458239 hasConceptScore W1991458239C41008148 @default.
- W1991458239 hasConceptScore W1991458239C43617362 @default.
- W1991458239 hasConceptScore W1991458239C527412718 @default.
- W1991458239 hasLocation W19914582391 @default.
- W1991458239 hasLocation W19914582392 @default.
- W1991458239 hasOpenAccess W1991458239 @default.
- W1991458239 hasPrimaryLocation W19914582391 @default.
- W1991458239 hasRelatedWork W1964213773 @default.
- W1991458239 hasRelatedWork W1986472198 @default.
- W1991458239 hasRelatedWork W2028772841 @default.
- W1991458239 hasRelatedWork W2038133193 @default.
- W1991458239 hasRelatedWork W2045299141 @default.
- W1991458239 hasRelatedWork W2076287290 @default.
- W1991458239 hasRelatedWork W2079073421 @default.
- W1991458239 hasRelatedWork W2150537933 @default.
- W1991458239 hasRelatedWork W3143930805 @default.
- W1991458239 hasRelatedWork W4245781838 @default.
- W1991458239 isParatext "false" @default.
- W1991458239 isRetracted "false" @default.
- W1991458239 magId "1991458239" @default.
- W1991458239 workType "article" @default.