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- W1991990280 abstract "A new problem in phylogenetic inference is presented, based on recent biological findings indicating a strong association between reversals (i.e., inversions) and repeats. These biological findings are formalized here in a new mathematical model, called repeat-annotated phylogenetic trees (RAPT). We show that, under RAPT, the evolutionary process—including both the tree-topology as well as internal node genome orders—is uniquely determined, a property that is of major significance both in theory and in practice. Furthermore, the repeats are employed to provide linear-time algorithms for reconstructing both the genomic orders and the phylogeny, which are NP-hard problems under the classical model of sorting by reversals (SBR)." @default.
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- W1991990280 date "2006-10-01" @default.
- W1991990280 modified "2023-09-24" @default.
- W1991990280 title "On the Repeat-Annotated Phylogenetic Tree Reconstruction Problem" @default.
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- W1991990280 doi "https://doi.org/10.1089/cmb.2006.13.1397" @default.
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