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• W1993954615 abstract "Increasingly large numbers of proteins require methods for functional annotation. This is typically based on pairwise inference from the homology of either protein sequence or structure. Recently, similarity networks have been presented to leverage both the ability to visualize relationships between proteins and assess the transferability of functional inference. Here we present PANADA, a novel toolkit for the visualization and analysis of protein similarity networks in Cytoscape. Networks can be constructed based on pairwise sequence or structural alignments either on a set of proteins or, alternatively, by database search from a single sequence. The Panada web server, executable for download and examples and extensive help files are available at URL: http://protein.bio.unipd.it/panada/." @default.
• W1993954615 created "2016-06-24" @default.
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• W1993954615 date "2013-11-12" @default.
• W1993954615 modified "2023-10-13" @default.
• W1993954615 title "PANADA: Protein Association Network Annotation, Determination and Analysis" @default.
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• W1993954615 doi "https://doi.org/10.1371/journal.pone.0078383" @default.
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