FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2011910635> ?p ?o ?g. }

• W2011910635 endingPage "W534" @default.
• W2011910635 startingPage "W531" @default.
• W2011910635 abstract "The most important mechanism in the regulation of transcription is the binding of a transcription factor (TF) to a DNA sequence called the TF binding site (TFBS). Most binding sites are short and degenerate, which makes predictions based on their primary sequence alone somewhat unreliable. We present a new web tool that implements a flexible and extensible algorithm for predicting TFBS. The algorithm makes use of both direct (the sequence) and several indirect readout features of protein-DNA complexes (biophysical properties such as bendability or the solvent-excluded surface of the DNA). This algorithm significantly outperforms state-of-the-art approaches for in silico identification of TFBS. Users can submit FASTA sequences for analysis in the PhysBinder integrative algorithm and choose from >60 different TF-binding models. The results of this analysis can be used to plan and steer wet-lab experiments. The PhysBinder web tool is freely available at http://bioit.dmbr.ugent.be/physbinder/index.php." @default.
• W2011910635 created "2016-06-24" @default.
• W2011910635 creator A5006686201 @default.
• W2011910635 creator A5018917647 @default.
• W2011910635 creator A5035047337 @default.
• W2011910635 creator A5045188252 @default.
• W2011910635 creator A5045362700 @default.
• W2011910635 creator A5053154258 @default.
• W2011910635 date "2013-04-24" @default.
• W2011910635 modified "2023-10-03" @default.
• W2011910635 title "PhysBinder: improving the prediction of transcription factor binding sites by flexible inclusion of biophysical properties" @default.
• W2011910635 cites W1987122345 @default.
• W2011910635 cites W1988294855 @default.
• W2011910635 cites W2012627860 @default.
• W2011910635 cites W2031750380 @default.
• W2011910635 cites W2037099334 @default.
• W2011910635 cites W2039709545 @default.
• W2011910635 cites W2113423333 @default.
• W2011910635 cites W2126561976 @default.
• W2011910635 cites W2127600515 @default.
• W2011910635 cites W2129562880 @default.
• W2011910635 cites W2132522861 @default.
• W2011910635 cites W2132955708 @default.
• W2011910635 cites W2133990480 @default.
• W2011910635 cites W2145091349 @default.
• W2011910635 cites W2146734921 @default.
• W2011910635 cites W2163837597 @default.
• W2011910635 cites W2259938310 @default.
• W2011910635 cites W2973185172 @default.
• W2011910635 doi "https://doi.org/10.1093/nar/gkt288" @default.
• W2011910635 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3692127" @default.
• W2011910635 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/23620286" @default.
• W2011910635 hasPublicationYear "2013" @default.
• W2011910635 type Work @default.
• W2011910635 sameAs 2011910635 @default.
• W2011910635 citedByCount "26" @default.
• W2011910635 countsByYear W20119106352014 @default.
• W2011910635 countsByYear W20119106352015 @default.
• W2011910635 countsByYear W20119106352016 @default.
• W2011910635 countsByYear W20119106352017 @default.
• W2011910635 countsByYear W20119106352018 @default.
• W2011910635 countsByYear W20119106352019 @default.
• W2011910635 countsByYear W20119106352020 @default.
• W2011910635 countsByYear W20119106352021 @default.
• W2011910635 countsByYear W20119106352023 @default.
• W2011910635 crossrefType "journal-article" @default.
• W2011910635 hasAuthorship W2011910635A5006686201 @default.
• W2011910635 hasAuthorship W2011910635A5018917647 @default.
• W2011910635 hasAuthorship W2011910635A5035047337 @default.
• W2011910635 hasAuthorship W2011910635A5045188252 @default.
• W2011910635 hasAuthorship W2011910635A5045362700 @default.
• W2011910635 hasAuthorship W2011910635A5053154258 @default.
• W2011910635 hasBestOaLocation W20119106351 @default.
• W2011910635 hasConcept C101762097 @default.
• W2011910635 hasConcept C104317684 @default.
• W2011910635 hasConcept C107824862 @default.
• W2011910635 hasConcept C110875604 @default.
• W2011910635 hasConcept C124101348 @default.
• W2011910635 hasConcept C136764020 @default.
• W2011910635 hasConcept C138885662 @default.
• W2011910635 hasConcept C150194340 @default.
• W2011910635 hasConcept C179926584 @default.
• W2011910635 hasConcept C2775905019 @default.
• W2011910635 hasConcept C2778112365 @default.
• W2011910635 hasConcept C2984519610 @default.
• W2011910635 hasConcept C3662595 @default.
• W2011910635 hasConcept C41008148 @default.
• W2011910635 hasConcept C41895202 @default.
• W2011910635 hasConcept C51679486 @default.
• W2011910635 hasConcept C54355233 @default.
• W2011910635 hasConcept C552990157 @default.
• W2011910635 hasConcept C60644358 @default.
• W2011910635 hasConcept C70721500 @default.
• W2011910635 hasConcept C86339819 @default.
• W2011910635 hasConcept C86803240 @default.
• W2011910635 hasConceptScore W2011910635C101762097 @default.
• W2011910635 hasConceptScore W2011910635C104317684 @default.
• W2011910635 hasConceptScore W2011910635C107824862 @default.
• W2011910635 hasConceptScore W2011910635C110875604 @default.
• W2011910635 hasConceptScore W2011910635C124101348 @default.
• W2011910635 hasConceptScore W2011910635C136764020 @default.
• W2011910635 hasConceptScore W2011910635C138885662 @default.
• W2011910635 hasConceptScore W2011910635C150194340 @default.
• W2011910635 hasConceptScore W2011910635C179926584 @default.
• W2011910635 hasConceptScore W2011910635C2775905019 @default.
• W2011910635 hasConceptScore W2011910635C2778112365 @default.
• W2011910635 hasConceptScore W2011910635C2984519610 @default.
• W2011910635 hasConceptScore W2011910635C3662595 @default.
• W2011910635 hasConceptScore W2011910635C41008148 @default.
• W2011910635 hasConceptScore W2011910635C41895202 @default.
• W2011910635 hasConceptScore W2011910635C51679486 @default.
• W2011910635 hasConceptScore W2011910635C54355233 @default.
• W2011910635 hasConceptScore W2011910635C552990157 @default.
• W2011910635 hasConceptScore W2011910635C60644358 @default.
• W2011910635 hasConceptScore W2011910635C70721500 @default.
• W2011910635 hasConceptScore W2011910635C86339819 @default.
• W2011910635 hasConceptScore W2011910635C86803240 @default.
• W2011910635 hasIssue "W1" @default.

• next