FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2012143472> ?p ?o ?g. }

• W2012143472 endingPage "207" @default.
• W2012143472 startingPage "189" @default.
• W2012143472 abstract "Naor and Brutlag [D. Naor, D. Brutlag, Proceedings of the Fourth Symposium on Combinational Pattern Matching, Lecture Notes in Computer Science, 684 (1993) 179–196] proposed a new compact representation for suboptimal alignments. The kernel of that representation is a minimal directed acyclic graph (DAG) containing all suboptimal alignments. In this paper, a flexible space-saving scheme for computing such a DAG is proposed. In spite of the need for storing the DAG, these methods require very little additional working space. For two sequences of lengths M and M (M ⩽ N), the general scheme runs in O(MN log(1/gU)) time and O(Mϒ(M + N) space for arbitrarily small 0 < ϒ < 1. As a consequence, the worst-case running time if O(MN log log M) using only O(N) space. A variant of the method restricts the log log M factor to affect only grid points lying between suboptimal alignments. It is also shown that a running time of O(MN) can be achieved by using only O(M1+ε + N) space for arbitrarily small constant ε > 0. To exploit the computed DAG, a variant of Aho-Corasick pattern matching machine [A.V. Aho, M.J. Corasick, Comm. ACM 18 (1975) 333–340] is employed to locate all occurrences of specified patterns, and then a path is found in the DAG that maximizes the sum of the scores of the non-overlapping patterns occurring in it. An example illustrates the utility." @default.
• W2012143472 created "2016-06-24" @default.
• W2012143472 creator A5033888490 @default.
• W2012143472 date "1998-03-01" @default.
• W2012143472 modified "2023-10-18" @default.
• W2012143472 title "On computing all suboptimal alignments" @default.
• W2012143472 cites W1497494381 @default.
• W2012143472 cites W1527067054 @default.
• W2012143472 cites W1967762061 @default.
• W2012143472 cites W1970858544 @default.
• W2012143472 cites W1974326986 @default.
• W2012143472 cites W2021998455 @default.
• W2012143472 cites W2027490384 @default.
• W2012143472 cites W2028249034 @default.
• W2012143472 cites W2042158592 @default.
• W2012143472 cites W2049074555 @default.
• W2012143472 cites W2066475544 @default.
• W2012143472 cites W2083069708 @default.
• W2012143472 cites W2096827683 @default.
• W2012143472 cites W2099964107 @default.
• W2012143472 cites W2102659807 @default.
• W2012143472 cites W2108215151 @default.
• W2012143472 cites W2113416388 @default.
• W2012143472 cites W2141395444 @default.
• W2012143472 cites W2147013615 @default.
• W2012143472 cites W2165654401 @default.
• W2012143472 cites W88386512 @default.
• W2012143472 doi "https://doi.org/10.1016/s0020-0255(97)10032-9" @default.
• W2012143472 hasPublicationYear "1998" @default.
• W2012143472 type Work @default.
• W2012143472 sameAs 2012143472 @default.
• W2012143472 citedByCount "8" @default.
• W2012143472 countsByYear W20121434722012 @default.
• W2012143472 crossrefType "journal-article" @default.
• W2012143472 hasAuthorship W2012143472A5033888490 @default.
• W2012143472 hasConcept C105795698 @default.
• W2012143472 hasConcept C111919701 @default.
• W2012143472 hasConcept C11413529 @default.
• W2012143472 hasConcept C114614502 @default.
• W2012143472 hasConcept C132525143 @default.
• W2012143472 hasConcept C146380142 @default.
• W2012143472 hasConcept C165064840 @default.
• W2012143472 hasConcept C176032523 @default.
• W2012143472 hasConcept C17744445 @default.
• W2012143472 hasConcept C187691185 @default.
• W2012143472 hasConcept C199360897 @default.
• W2012143472 hasConcept C199539241 @default.
• W2012143472 hasConcept C2524010 @default.
• W2012143472 hasConcept C2776359362 @default.
• W2012143472 hasConcept C2777735758 @default.
• W2012143472 hasConcept C2778572836 @default.
• W2012143472 hasConcept C33923547 @default.
• W2012143472 hasConcept C41008148 @default.
• W2012143472 hasConcept C63553672 @default.
• W2012143472 hasConcept C68859911 @default.
• W2012143472 hasConcept C74193536 @default.
• W2012143472 hasConcept C74197172 @default.
• W2012143472 hasConcept C94625758 @default.
• W2012143472 hasConceptScore W2012143472C105795698 @default.
• W2012143472 hasConceptScore W2012143472C111919701 @default.
• W2012143472 hasConceptScore W2012143472C11413529 @default.
• W2012143472 hasConceptScore W2012143472C114614502 @default.
• W2012143472 hasConceptScore W2012143472C132525143 @default.
• W2012143472 hasConceptScore W2012143472C146380142 @default.
• W2012143472 hasConceptScore W2012143472C165064840 @default.
• W2012143472 hasConceptScore W2012143472C176032523 @default.
• W2012143472 hasConceptScore W2012143472C17744445 @default.
• W2012143472 hasConceptScore W2012143472C187691185 @default.
• W2012143472 hasConceptScore W2012143472C199360897 @default.
• W2012143472 hasConceptScore W2012143472C199539241 @default.
• W2012143472 hasConceptScore W2012143472C2524010 @default.
• W2012143472 hasConceptScore W2012143472C2776359362 @default.
• W2012143472 hasConceptScore W2012143472C2777735758 @default.
• W2012143472 hasConceptScore W2012143472C2778572836 @default.
• W2012143472 hasConceptScore W2012143472C33923547 @default.
• W2012143472 hasConceptScore W2012143472C41008148 @default.
• W2012143472 hasConceptScore W2012143472C63553672 @default.
• W2012143472 hasConceptScore W2012143472C68859911 @default.
• W2012143472 hasConceptScore W2012143472C74193536 @default.
• W2012143472 hasConceptScore W2012143472C74197172 @default.
• W2012143472 hasConceptScore W2012143472C94625758 @default.
• W2012143472 hasIssue "1-4" @default.
• W2012143472 hasLocation W20121434721 @default.
• W2012143472 hasOpenAccess W2012143472 @default.
• W2012143472 hasPrimaryLocation W20121434721 @default.
• W2012143472 hasRelatedWork W2012143472 @default.
• W2012143472 hasRelatedWork W2068283945 @default.
• W2012143472 hasRelatedWork W2104685510 @default.
• W2012143472 hasRelatedWork W2151543040 @default.
• W2012143472 hasRelatedWork W2156167308 @default.
• W2012143472 hasRelatedWork W2321452898 @default.
• W2012143472 hasRelatedWork W2374089414 @default.
• W2012143472 hasRelatedWork W2745621730 @default.
• W2012143472 hasRelatedWork W2952392475 @default.
• W2012143472 hasRelatedWork W4237634120 @default.
• W2012143472 hasVolume "105" @default.
• W2012143472 isParatext "false" @default.
• W2012143472 isRetracted "false" @default.

• next