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- W2012195021 abstract "Model off-lattice sequences in two dimensions are constructed so that their native states are close to an on-lattice target. The Hamiltonian involves the Lennard-Jones and harmonic interactions. The native states of these sequences are determined with a high degree of certainty through Monte Carlo processes. The sequences are characterized thermodynamically and kinetically. It is shown that the rank-ordering-based scheme of the assignment of contact energies typically fails in off-lattice models even though it generates high stability of on-lattice sequences. Similar to the on-lattice case, Go-like modeling, in which the interaction potentials are restricted to the native contacts in a target shape, gives rise to good folding properties. Involving other contacts deteriorates these properties." @default.
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- W2012195021 date "1999-01-01" @default.
- W2012195021 modified "2023-09-25" @default.
- W2012195021 title "Folding in two-dimensional off-lattice models of proteins" @default.
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- W2012195021 doi "https://doi.org/10.1103/physreve.59.970" @default.
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