FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2014989101> ?p ?o ?g. }

• W2014989101 endingPage "3035" @default.
• W2014989101 startingPage "3035" @default.
• W2014989101 abstract "A computer program is presented which determines the secondary structure of linear RNA molecules by simulating a hypothetical process of folding. This process implies the concept of lsquo;nucleation centres‘, regions in RNA which locally trigger the folding. During the simulation, the RNA is allowed to fold into pseudoknotted structures, unlike all other programs predicting RNA secondary structure. The simulation uses published, experimentally determined free energy values for nearest neighbour base pair stackings and loop regions, except for new extrapolated values for loops larger than seven nucleotides. The free energy value for a loop arising from pseudoknot formation is set to a single, estimated value of 4.2 kcal/mole. Especially in the case of long RNA sequences, our program appears superior to other secondary structure predicting programs described so far, as tests on tRNAs, the LSU intron of Tetrahymena thermophlla and a number of plant viral RNAs show. In addition, pseudoknotted structures are often predicted successfully. The program is written in mainframe APL and is adapted to run on IBM compatible PCs, Atari ST and Macintosh personal computers. On an 8 MHz 8088 standard PC without coprocessor, using STSC APL, it folds a sequence of 700 nucleotides in one and a half hour." @default.
• W2014989101 created "2016-06-24" @default.
• W2014989101 creator A5002931662 @default.
• W2014989101 creator A5020598435 @default.
• W2014989101 creator A5029565299 @default.
• W2014989101 creator A5032719094 @default.
• W2014989101 date "1990-01-01" @default.
• W2014989101 modified "2023-10-17" @default.
• W2014989101 title "Prediction of RNA secondary structure, including pseudoknotting, by computer simulation" @default.
• W2014989101 cites W1005666322 @default.
• W2014989101 cites W122658792 @default.
• W2014989101 cites W1501608645 @default.
• W2014989101 cites W1971402940 @default.
• W2014989101 cites W1976601025 @default.
• W2014989101 cites W1981777358 @default.
• W2014989101 cites W1995403172 @default.
• W2014989101 cites W2002990801 @default.
• W2014989101 cites W2009595152 @default.
• W2014989101 cites W2011078969 @default.
• W2014989101 cites W2011765138 @default.
• W2014989101 cites W2013465290 @default.
• W2014989101 cites W2017313617 @default.
• W2014989101 cites W2019910194 @default.
• W2014989101 cites W2022561737 @default.
• W2014989101 cites W2022794520 @default.
• W2014989101 cites W2025763720 @default.
• W2014989101 cites W2039915263 @default.
• W2014989101 cites W2040843640 @default.
• W2014989101 cites W2046068894 @default.
• W2014989101 cites W2051281883 @default.
• W2014989101 cites W2059329364 @default.
• W2014989101 cites W2063040421 @default.
• W2014989101 cites W2066601885 @default.
• W2014989101 cites W2070098702 @default.
• W2014989101 cites W2083488023 @default.
• W2014989101 cites W2086460051 @default.
• W2014989101 cites W2090375359 @default.
• W2014989101 cites W2092974248 @default.
• W2014989101 cites W2117934381 @default.
• W2014989101 cites W2122196775 @default.
• W2014989101 cites W2124162379 @default.
• W2014989101 cites W2140688225 @default.
• W2014989101 cites W2158822429 @default.
• W2014989101 cites W2167673850 @default.
• W2014989101 cites W2332949416 @default.
• W2014989101 doi "https://doi.org/10.1093/nar/18.10.3035" @default.
• W2014989101 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/330835" @default.
• W2014989101 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/1693421" @default.
• W2014989101 hasPublicationYear "1990" @default.
• W2014989101 type Work @default.
• W2014989101 sameAs 2014989101 @default.
• W2014989101 citedByCount "217" @default.
• W2014989101 countsByYear W20149891012012 @default.
• W2014989101 countsByYear W20149891012013 @default.
• W2014989101 countsByYear W20149891012014 @default.
• W2014989101 countsByYear W20149891012015 @default.
• W2014989101 countsByYear W20149891012016 @default.
• W2014989101 countsByYear W20149891012017 @default.
• W2014989101 countsByYear W20149891012018 @default.
• W2014989101 countsByYear W20149891012019 @default.
• W2014989101 countsByYear W20149891012021 @default.
• W2014989101 crossrefType "journal-article" @default.
• W2014989101 hasAuthorship W2014989101A5002931662 @default.
• W2014989101 hasAuthorship W2014989101A5020598435 @default.
• W2014989101 hasAuthorship W2014989101A5029565299 @default.
• W2014989101 hasAuthorship W2014989101A5032719094 @default.
• W2014989101 hasBestOaLocation W20149891012 @default.
• W2014989101 hasConcept C104317684 @default.
• W2014989101 hasConcept C105130999 @default.
• W2014989101 hasConcept C119599485 @default.
• W2014989101 hasConcept C126142528 @default.
• W2014989101 hasConcept C127413603 @default.
• W2014989101 hasConcept C185581394 @default.
• W2014989101 hasConcept C2776545253 @default.
• W2014989101 hasConcept C2777166614 @default.
• W2014989101 hasConcept C54355233 @default.
• W2014989101 hasConcept C552990157 @default.
• W2014989101 hasConcept C55493867 @default.
• W2014989101 hasConcept C62614982 @default.
• W2014989101 hasConcept C67705224 @default.
• W2014989101 hasConcept C70721500 @default.
• W2014989101 hasConcept C85468374 @default.
• W2014989101 hasConcept C86803240 @default.
• W2014989101 hasConceptScore W2014989101C104317684 @default.
• W2014989101 hasConceptScore W2014989101C105130999 @default.
• W2014989101 hasConceptScore W2014989101C119599485 @default.
• W2014989101 hasConceptScore W2014989101C126142528 @default.
• W2014989101 hasConceptScore W2014989101C127413603 @default.
• W2014989101 hasConceptScore W2014989101C185581394 @default.
• W2014989101 hasConceptScore W2014989101C2776545253 @default.
• W2014989101 hasConceptScore W2014989101C2777166614 @default.
• W2014989101 hasConceptScore W2014989101C54355233 @default.
• W2014989101 hasConceptScore W2014989101C552990157 @default.
• W2014989101 hasConceptScore W2014989101C55493867 @default.
• W2014989101 hasConceptScore W2014989101C62614982 @default.
• W2014989101 hasConceptScore W2014989101C67705224 @default.
• W2014989101 hasConceptScore W2014989101C70721500 @default.
• W2014989101 hasConceptScore W2014989101C85468374 @default.

• next