FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2018149277> ?p ?o ?g. }

• W2018149277 endingPage "866" @default.
• W2018149277 startingPage "866" @default.
• W2018149277 abstract "Common bean (Phaseolus vulgaris) is grown throughout the world and comprises roughly 50% of the grain legumes consumed worldwide. Despite this, genetic resources for common beans have been lacking. Next generation sequencing, has facilitated our investigation of the gene expression profiles associated with biologically important traits in common bean. An increased understanding of gene expression in common bean will improve our understanding of gene expression patterns in other legume species.Combining recently developed genomic resources for Phaseolus vulgaris, including predicted gene calls, with RNA-Seq technology, we measured the gene expression patterns from 24 samples collected from seven tissues at developmentally important stages and from three nitrogen treatments. Gene expression patterns throughout the plant were analyzed to better understand changes due to nodulation, seed development, and nitrogen utilization. We have identified 11,010 genes differentially expressed with a fold change ≥ 2 and a P-value < 0.05 between different tissues at the same time point, 15,752 genes differentially expressed within a tissue due to changes in development, and 2,315 genes expressed only in a single tissue. These analyses identified 2,970 genes with expression patterns that appear to be directly dependent on the source of available nitrogen. Finally, we have assembled this data in a publicly available database, The Phaseolus vulgaris Gene Expression Atlas (Pv GEA), http://plantgrn.noble.org/PvGEA/ . Using the website, researchers can query gene expression profiles of their gene of interest, search for genes expressed in different tissues, or download the dataset in a tabular form.These data provide the basis for a gene expression atlas, which will facilitate functional genomic studies in common bean. Analysis of this dataset has identified genes important in regulating seed composition and has increased our understanding of nodulation and impact of the nitrogen source on assimilation and distribution throughout the plant." @default.
• W2018149277 created "2016-06-24" @default.
• W2018149277 creator A5000452545 @default.
• W2018149277 creator A5011610969 @default.
• W2018149277 creator A5016308555 @default.
• W2018149277 creator A5025380264 @default.
• W2018149277 creator A5027835055 @default.
• W2018149277 creator A5041498623 @default.
• W2018149277 creator A5044353080 @default.
• W2018149277 creator A5060113872 @default.
• W2018149277 creator A5062535756 @default.
• W2018149277 creator A5068330292 @default.
• W2018149277 creator A5069529740 @default.
• W2018149277 creator A5090752359 @default.
• W2018149277 date "2014-01-01" @default.
• W2018149277 modified "2023-10-10" @default.
• W2018149277 title "An RNA-Seq based gene expression atlas of the common bean" @default.
• W2018149277 cites W1626869794 @default.
• W2018149277 cites W1790398017 @default.
• W2018149277 cites W1915646558 @default.
• W2018149277 cites W1965089178 @default.
• W2018149277 cites W1967508425 @default.
• W2018149277 cites W1970762697 @default.
• W2018149277 cites W1972146704 @default.
• W2018149277 cites W1982779630 @default.
• W2018149277 cites W1983166173 @default.
• W2018149277 cites W1984708728 @default.
• W2018149277 cites W1989780650 @default.
• W2018149277 cites W1990960161 @default.
• W2018149277 cites W1991989015 @default.
• W2018149277 cites W1992932825 @default.
• W2018149277 cites W1993846687 @default.
• W2018149277 cites W2008525609 @default.
• W2018149277 cites W2009419055 @default.
• W2018149277 cites W2012260721 @default.
• W2018149277 cites W2014156088 @default.
• W2018149277 cites W2015059969 @default.
• W2018149277 cites W2016370480 @default.
• W2018149277 cites W2021044098 @default.
• W2018149277 cites W2022514401 @default.
• W2018149277 cites W2025119870 @default.
• W2018149277 cites W2028278773 @default.
• W2018149277 cites W2028833004 @default.
• W2018149277 cites W2030612764 @default.
• W2018149277 cites W2034206097 @default.
• W2018149277 cites W2035298204 @default.
• W2018149277 cites W2038749716 @default.
• W2018149277 cites W2053758959 @default.
• W2018149277 cites W2057945124 @default.
• W2018149277 cites W2059105183 @default.
• W2018149277 cites W2070516629 @default.
• W2018149277 cites W2074363252 @default.
• W2018149277 cites W2074665339 @default.
• W2018149277 cites W2077650355 @default.
• W2018149277 cites W2077809181 @default.
• W2018149277 cites W2086491289 @default.
• W2018149277 cites W2088673572 @default.
• W2018149277 cites W2089008216 @default.
• W2018149277 cites W2089660511 @default.
• W2018149277 cites W2091358620 @default.
• W2018149277 cites W2093387105 @default.
• W2018149277 cites W2093851679 @default.
• W2018149277 cites W2095272389 @default.
• W2018149277 cites W2095594212 @default.
• W2018149277 cites W2101218969 @default.
• W2018149277 cites W2103498575 @default.
• W2018149277 cites W2106629711 @default.
• W2018149277 cites W2107925322 @default.
• W2018149277 cites W2108522414 @default.
• W2018149277 cites W2109389042 @default.
• W2018149277 cites W2109764708 @default.
• W2018149277 cites W2109931944 @default.
• W2018149277 cites W2111022336 @default.
• W2018149277 cites W2115487059 @default.
• W2018149277 cites W2120287165 @default.
• W2018149277 cites W2121095739 @default.
• W2018149277 cites W2123836320 @default.
• W2018149277 cites W2124985265 @default.
• W2018149277 cites W2126707901 @default.
• W2018149277 cites W2131698263 @default.
• W2018149277 cites W2132063003 @default.
• W2018149277 cites W2132970959 @default.
• W2018149277 cites W2135541455 @default.
• W2018149277 cites W2136325182 @default.
• W2018149277 cites W2137261859 @default.
• W2018149277 cites W2139838547 @default.
• W2018149277 cites W2142478510 @default.
• W2018149277 cites W2142906634 @default.
• W2018149277 cites W2143510463 @default.
• W2018149277 cites W2153497656 @default.
• W2018149277 cites W2154431984 @default.
• W2018149277 cites W2154462685 @default.
• W2018149277 cites W2156017482 @default.
• W2018149277 cites W2156032987 @default.
• W2018149277 cites W2158656211 @default.
• W2018149277 cites W2158918882 @default.
• W2018149277 cites W2161106528 @default.
• W2018149277 cites W2162077247 @default.

• next