FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2018175635> ?p ?o ?g. }

• W2018175635 abstract "Pea has a complex genome of 4.3 Gb for which only limited genomic resources are available to date. Although SNP markers are now highly valuable for research and modern breeding, only a few are described and used in pea for genetic diversity and linkage analysis. We developed a large resource by cDNA sequencing of 8 genotypes representative of modern breeding material using the Roche 454 technology, combining both long reads (400 bp) and high coverage (3.8 million reads, reaching a total of 1,369 megabases). Sequencing data were assembled and generated a 68 K unigene set, from which 41 K were annotated from their best blast hit against the model species Medicago truncatula. Annotated contigs showed an even distribution along M. truncatula pseudochromosomes, suggesting a good representation of the pea genome. 10 K pea contigs were found to be polymorphic among the genetic material surveyed, corresponding to 35 K SNPs. We validated a subset of 1538 SNPs through the GoldenGate assay, proving their ability to structure a diversity panel of breeding germplasm. Among them, 1340 were genetically mapped and used to build a new consensus map comprising a total of 2070 markers. Based on blast analysis, we could establish 1252 bridges between our pea consensus map and the pseudochromosomes of M. truncatula, which provides new insight on synteny between the two species. Our approach created significant new resources in pea, i.e. the most comprehensive genetic map to date tightly linked to the model species M. truncatula and a large SNP resource for both academic research and breeding." @default.
• W2018175635 created "2016-06-24" @default.
• W2018175635 creator A5002072692 @default.
• W2018175635 creator A5008739021 @default.
• W2018175635 creator A5018544139 @default.
• W2018175635 creator A5031527226 @default.
• W2018175635 creator A5035999455 @default.
• W2018175635 creator A5036966559 @default.
• W2018175635 creator A5038285270 @default.
• W2018175635 creator A5054230526 @default.
• W2018175635 creator A5058546544 @default.
• W2018175635 creator A5060485851 @default.
• W2018175635 creator A5071572686 @default.
• W2018175635 creator A5076868838 @default.
• W2018175635 date "2014-02-12" @default.
• W2018175635 modified "2023-10-17" @default.
• W2018175635 title "Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea" @default.
• W2018175635 cites W1964146918 @default.
• W2018175635 cites W1976970938 @default.
• W2018175635 cites W1980702263 @default.
• W2018175635 cites W1983022184 @default.
• W2018175635 cites W1985484001 @default.
• W2018175635 cites W1987022423 @default.
• W2018175635 cites W1998000751 @default.
• W2018175635 cites W1999290563 @default.
• W2018175635 cites W2005047696 @default.
• W2018175635 cites W2007383978 @default.
• W2018175635 cites W2011637810 @default.
• W2018175635 cites W2013257559 @default.
• W2018175635 cites W2013728720 @default.
• W2018175635 cites W2016381774 @default.
• W2018175635 cites W2017200955 @default.
• W2018175635 cites W2022826251 @default.
• W2018175635 cites W2022978610 @default.
• W2018175635 cites W2024312710 @default.
• W2018175635 cites W2024998267 @default.
• W2018175635 cites W2034819034 @default.
• W2018175635 cites W2038574100 @default.
• W2018175635 cites W2039618894 @default.
• W2018175635 cites W2043290472 @default.
• W2018175635 cites W2045261785 @default.
• W2018175635 cites W2045640470 @default.
• W2018175635 cites W2047419084 @default.
• W2018175635 cites W2048887534 @default.
• W2018175635 cites W2054370619 @default.
• W2018175635 cites W2055136140 @default.
• W2018175635 cites W2058503111 @default.
• W2018175635 cites W2059670608 @default.
• W2018175635 cites W2066337536 @default.
• W2018175635 cites W2070714761 @default.
• W2018175635 cites W2074844694 @default.
• W2018175635 cites W2081098944 @default.
• W2018175635 cites W2084034534 @default.
• W2018175635 cites W2086338036 @default.
• W2018175635 cites W2086584462 @default.
• W2018175635 cites W2087576544 @default.
• W2018175635 cites W2089244059 @default.
• W2018175635 cites W2090910720 @default.
• W2018175635 cites W2093779882 @default.
• W2018175635 cites W2099270845 @default.
• W2018175635 cites W2100703845 @default.
• W2018175635 cites W2103714924 @default.
• W2018175635 cites W2104430865 @default.
• W2018175635 cites W2106826988 @default.
• W2018175635 cites W2114475493 @default.
• W2018175635 cites W2115289050 @default.
• W2018175635 cites W2120457919 @default.
• W2018175635 cites W2124195532 @default.
• W2018175635 cites W2125804156 @default.
• W2018175635 cites W2127491672 @default.
• W2018175635 cites W2128792057 @default.
• W2018175635 cites W2132917403 @default.
• W2018175635 cites W2134760402 @default.
• W2018175635 cites W2136044834 @default.
• W2018175635 cites W2141616651 @default.
• W2018175635 cites W2149420061 @default.
• W2018175635 cites W2150871890 @default.
• W2018175635 cites W2153446149 @default.
• W2018175635 cites W2154883726 @default.
• W2018175635 cites W2164031281 @default.
• W2018175635 cites W2164154943 @default.
• W2018175635 cites W2169907253 @default.
• W2018175635 cites W2468266521 @default.
• W2018175635 cites W4245430571 @default.
• W2018175635 doi "https://doi.org/10.1186/1471-2164-15-126" @default.
• W2018175635 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3925251" @default.
• W2018175635 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24521263" @default.
• W2018175635 hasPublicationYear "2014" @default.
• W2018175635 type Work @default.
• W2018175635 sameAs 2018175635 @default.
• W2018175635 citedByCount "94" @default.
• W2018175635 countsByYear W20181756352014 @default.
• W2018175635 countsByYear W20181756352015 @default.
• W2018175635 countsByYear W20181756352016 @default.
• W2018175635 countsByYear W20181756352017 @default.
• W2018175635 countsByYear W20181756352018 @default.
• W2018175635 countsByYear W20181756352019 @default.
• W2018175635 countsByYear W20181756352020 @default.
• W2018175635 countsByYear W20181756352021 @default.
• W2018175635 countsByYear W20181756352022 @default.

• next