Matches in SemOpenAlex for { <https://semopenalex.org/work/W2022382760> ?p ?o ?g. }
Showing items 1 to 58 of
58
with 100 items per page.
- W2022382760 endingPage "348" @default.
- W2022382760 startingPage "341" @default.
- W2022382760 abstract "GOR algorithms have long been a standard methodology for predicting protein secondary structure from primary sequence. We have developed two short validation sequences for the GOR I and GOR II algorithms. Use of these sequences with seven commercial and non-commercial implementations of these algorithms demonstrated that several were incorrect implementations, including two of the three commercial modules implementing the GOR I algorithm. This may be due to an easy misinterpretation of the GOR I algorithm and related data tables. We present the validation sequences and discuss implications of this widely propagated error on secondary and tertiary structure prediction, using several proteins of known structure in three different structural classes as examples. A valid GOR I implementation predicts secondary structure increases the accuracy of predictions by from 1-13 percentage points over an invalid implementation based on the easy misinterpretation. A valid implementation of the GOR I and GOR II algorithms is available from the authors." @default.
- W2022382760 created "2016-06-24" @default.
- W2022382760 creator A5030943120 @default.
- W2022382760 creator A5050808244 @default.
- W2022382760 date "1994-01-01" @default.
- W2022382760 modified "2023-10-18" @default.
- W2022382760 title "Valid and invalid implementations of GOR secondary structure predictions" @default.
- W2022382760 doi "https://doi.org/10.1093/bioinformatics/10.3.341" @default.
- W2022382760 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/7922693" @default.
- W2022382760 hasPublicationYear "1994" @default.
- W2022382760 type Work @default.
- W2022382760 sameAs 2022382760 @default.
- W2022382760 citedByCount "2" @default.
- W2022382760 crossrefType "journal-article" @default.
- W2022382760 hasAuthorship W2022382760A5030943120 @default.
- W2022382760 hasAuthorship W2022382760A5050808244 @default.
- W2022382760 hasConcept C11413529 @default.
- W2022382760 hasConcept C162319229 @default.
- W2022382760 hasConcept C199360897 @default.
- W2022382760 hasConcept C26713055 @default.
- W2022382760 hasConcept C2778112365 @default.
- W2022382760 hasConcept C41008148 @default.
- W2022382760 hasConcept C54355233 @default.
- W2022382760 hasConcept C55493867 @default.
- W2022382760 hasConcept C62614982 @default.
- W2022382760 hasConcept C86803240 @default.
- W2022382760 hasConceptScore W2022382760C11413529 @default.
- W2022382760 hasConceptScore W2022382760C162319229 @default.
- W2022382760 hasConceptScore W2022382760C199360897 @default.
- W2022382760 hasConceptScore W2022382760C26713055 @default.
- W2022382760 hasConceptScore W2022382760C2778112365 @default.
- W2022382760 hasConceptScore W2022382760C41008148 @default.
- W2022382760 hasConceptScore W2022382760C54355233 @default.
- W2022382760 hasConceptScore W2022382760C55493867 @default.
- W2022382760 hasConceptScore W2022382760C62614982 @default.
- W2022382760 hasConceptScore W2022382760C86803240 @default.
- W2022382760 hasIssue "3" @default.
- W2022382760 hasLocation W20223827601 @default.
- W2022382760 hasLocation W20223827602 @default.
- W2022382760 hasOpenAccess W2022382760 @default.
- W2022382760 hasPrimaryLocation W20223827601 @default.
- W2022382760 hasRelatedWork W130366599 @default.
- W2022382760 hasRelatedWork W144022585 @default.
- W2022382760 hasRelatedWork W1504421836 @default.
- W2022382760 hasRelatedWork W1506404239 @default.
- W2022382760 hasRelatedWork W1955004327 @default.
- W2022382760 hasRelatedWork W1962019683 @default.
- W2022382760 hasRelatedWork W2164520940 @default.
- W2022382760 hasRelatedWork W270904624 @default.
- W2022382760 hasRelatedWork W2750614659 @default.
- W2022382760 hasRelatedWork W2496205912 @default.
- W2022382760 hasVolume "10" @default.
- W2022382760 isParatext "false" @default.
- W2022382760 isRetracted "false" @default.
- W2022382760 magId "2022382760" @default.
- W2022382760 workType "article" @default.