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• W2023014827 startingPage "1407" @default.
• W2023014827 abstract "Activated cortical domains (ACDs) are regions of the plant cell cortex performing localized membrane turnover, delimited by concerted action of the cortical cytoskeleton and endomembrane compartments. Arabidopsis thaliana rhizodermis consists of two cell types differing by a single ACD (trichoblasts, carrying tip-growing root hairs, and hairless atrichoblasts), providing a model for the study of ACD determination. We compiled a set of genes specifically upregulated in root hairs from published transcriptome data, and compared it with a virtual Arabidopsis root hair proteome, i.e. a list of computationally identified homologs of proteins from the published soybean root hair proteome. Both data sets were enriched in genes and proteins associated with root hairs in functional studies, but there was little overlap between the transcriptome and the proteome: the former captured gene products specific to root hairs, while the latter selected those abundant in root hairs but not necessarily specific to them. Decisive steps in ACD specification may be performed by signaling proteins of high expression specifity and low abundance. Nevertheless, 73 genes specifically transcribed in Arabidopsis trichoblasts or root hairs encode homologs of abundant root hair proteins from soybean. Most of them encode housekeeping proteins required for rapid tip growth. However, among the candidates is also a generative actin isoform, ACT11. Preliminary characterization of an act11 mutant allele indeed suggests a hitherto unexpected role for this gene in root and root hair development." @default.
• W2023014827 created "2016-06-24" @default.
• W2023014827 creator A5035322394 @default.
• W2023014827 creator A5078098666 @default.
• W2023014827 creator A5080824343 @default.
• W2023014827 date "2010-11-01" @default.
• W2023014827 modified "2023-09-25" @default.
• W2023014827 title "Computational identification of root hair-specific genes in Arabidopsis" @default.
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• W2023014827 doi "https://doi.org/10.4161/psb.5.11.13358" @default.
• W2023014827 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3115242" @default.
• W2023014827 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/21051945" @default.
• W2023014827 hasPublicationYear "2010" @default.
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