FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2024172842> ?p ?o ?g. }

• W2024172842 endingPage "262" @default.
• W2024172842 startingPage "256" @default.
• W2024172842 abstract "We conducted a detailed analysis of duplicate genes in three complete genomes: yeast, Drosophila, and Caenorhabditis elegans. For two proteins belonging to the same family we used the criteria: (1) their similarity is > or =I (I = 30% if L > or = 150 a.a. and I = 0.01n + 4.8L(-0.32(1 + exp(-L/1000))) if L < 150 a.a., where n = 6 and L is the length of the alignable region), and (2) the length of the alignable region between the two sequences is > or = 80% of the longer protein. We found it very important to delete isoforms (caused by alternative splicing), same genes with different names, and proteins derived from repetitive elements. We estimated that there were 530, 674, and 1,219 protein families in yeast, Drosophila, and C. elegans, respectively, so, as expected, yeast has the smallest number of duplicate genes. However, for the duplicate pairs with the number of substitutions per synonymous site (K(S)) < 0.01, Drosophila has only seven pairs, whereas yeast has 58 pairs and nematode has 153 pairs. After considering the possible effects of codon usage bias and gene conversion, these numbers became 6, 55, and 147, respectively. Thus, Drosophila appears to have much fewer young duplicate genes than do yeast and nematode. The larger numbers of duplicate pairs with K(S) < 0.01 in yeast and C. elegans were probably largely caused by block duplications. At any rate, it is clear that the genome of Drosophila melanogaster has undergone few gene duplications in the recent past and has much fewer gene families than C. elegans." @default.
• W2024172842 created "2016-06-24" @default.
• W2024172842 creator A5054373289 @default.
• W2024172842 creator A5056265396 @default.
• W2024172842 creator A5075135655 @default.
• W2024172842 creator A5080527114 @default.
• W2024172842 creator A5089013045 @default.
• W2024172842 date "2002-03-01" @default.
• W2024172842 modified "2023-10-05" @default.
• W2024172842 title "Extent of Gene Duplication in the Genomes of Drosophila, Nematode, and Yeast" @default.
• W2024172842 cites W1494075612 @default.
• W2024172842 cites W1544832590 @default.
• W2024172842 cites W1550695177 @default.
• W2024172842 cites W1641544182 @default.
• W2024172842 cites W1805429580 @default.
• W2024172842 cites W1945308210 @default.
• W2024172842 cites W1973491891 @default.
• W2024172842 cites W1980041175 @default.
• W2024172842 cites W1983906182 @default.
• W2024172842 cites W2004004689 @default.
• W2024172842 cites W2019591778 @default.
• W2024172842 cites W2026139443 @default.
• W2024172842 cites W2033048136 @default.
• W2024172842 cites W2065461553 @default.
• W2024172842 cites W2071726225 @default.
• W2024172842 cites W2101220662 @default.
• W2024172842 cites W2102122585 @default.
• W2024172842 cites W2106013076 @default.
• W2024172842 cites W2115011276 @default.
• W2024172842 cites W2129448726 @default.
• W2024172842 cites W2129552107 @default.
• W2024172842 cites W2157785110 @default.
• W2024172842 cites W2161481249 @default.
• W2024172842 cites W2169659264 @default.
• W2024172842 cites W2169718509 @default.
• W2024172842 cites W4229487902 @default.
• W2024172842 doi "https://doi.org/10.1093/oxfordjournals.molbev.a004079" @default.
• W2024172842 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/11861885" @default.
• W2024172842 hasPublicationYear "2002" @default.
• W2024172842 type Work @default.
• W2024172842 sameAs 2024172842 @default.
• W2024172842 citedByCount "399" @default.
• W2024172842 countsByYear W20241728422012 @default.
• W2024172842 countsByYear W20241728422013 @default.
• W2024172842 countsByYear W20241728422014 @default.
• W2024172842 countsByYear W20241728422015 @default.
• W2024172842 countsByYear W20241728422016 @default.
• W2024172842 countsByYear W20241728422017 @default.
• W2024172842 countsByYear W20241728422018 @default.
• W2024172842 countsByYear W20241728422019 @default.
• W2024172842 countsByYear W20241728422020 @default.
• W2024172842 countsByYear W20241728422021 @default.
• W2024172842 countsByYear W20241728422022 @default.
• W2024172842 countsByYear W20241728422023 @default.
• W2024172842 crossrefType "journal-article" @default.
• W2024172842 hasAuthorship W2024172842A5054373289 @default.
• W2024172842 hasAuthorship W2024172842A5056265396 @default.
• W2024172842 hasAuthorship W2024172842A5075135655 @default.
• W2024172842 hasAuthorship W2024172842A5080527114 @default.
• W2024172842 hasAuthorship W2024172842A5089013045 @default.
• W2024172842 hasBestOaLocation W20241728421 @default.
• W2024172842 hasConcept C104317684 @default.
• W2024172842 hasConcept C141231307 @default.
• W2024172842 hasConcept C2776041557 @default.
• W2024172842 hasConcept C2776496032 @default.
• W2024172842 hasConcept C2778944004 @default.
• W2024172842 hasConcept C2779222958 @default.
• W2024172842 hasConcept C2780104201 @default.
• W2024172842 hasConcept C54355233 @default.
• W2024172842 hasConcept C54458228 @default.
• W2024172842 hasConcept C5911399 @default.
• W2024172842 hasConcept C67705224 @default.
• W2024172842 hasConcept C7602840 @default.
• W2024172842 hasConcept C86803240 @default.
• W2024172842 hasConceptScore W2024172842C104317684 @default.
• W2024172842 hasConceptScore W2024172842C141231307 @default.
• W2024172842 hasConceptScore W2024172842C2776041557 @default.
• W2024172842 hasConceptScore W2024172842C2776496032 @default.
• W2024172842 hasConceptScore W2024172842C2778944004 @default.
• W2024172842 hasConceptScore W2024172842C2779222958 @default.
• W2024172842 hasConceptScore W2024172842C2780104201 @default.
• W2024172842 hasConceptScore W2024172842C54355233 @default.
• W2024172842 hasConceptScore W2024172842C54458228 @default.
• W2024172842 hasConceptScore W2024172842C5911399 @default.
• W2024172842 hasConceptScore W2024172842C67705224 @default.
• W2024172842 hasConceptScore W2024172842C7602840 @default.
• W2024172842 hasConceptScore W2024172842C86803240 @default.
• W2024172842 hasIssue "3" @default.
• W2024172842 hasLocation W20241728421 @default.
• W2024172842 hasLocation W20241728422 @default.
• W2024172842 hasOpenAccess W2024172842 @default.
• W2024172842 hasPrimaryLocation W20241728421 @default.
• W2024172842 hasRelatedWork W1809349505 @default.
• W2024172842 hasRelatedWork W1946787458 @default.
• W2024172842 hasRelatedWork W1976338973 @default.
• W2024172842 hasRelatedWork W2033525251 @default.
• W2024172842 hasRelatedWork W2125731289 @default.
• W2024172842 hasRelatedWork W2129202098 @default.

• next