Matches in SemOpenAlex for { <https://semopenalex.org/work/W2025111520> ?p ?o ?g. }
Showing items 1 to 97 of
97
with 100 items per page.
- W2025111520 abstract "Genomes present various types of repeated structures having important roles in the mechanism of evolution. In particular, tandem repeats are analysed for their impact on genetic backgrounds of inherited diseases. However, the main objective of today's de novo assemblers is to output long, high-quality, assembled sequences; to this end, they use heuristic-based assembling procedures, which can leave many repeated regions unassembled - and in particular exact tandem repeats - due to the genomes complexity. In this paper, we propose an effective method, called DExTaR, that improves the detection of exact tandem repeats (ETRs) in any de novo de Bruijn assembly. DExTaR is based on a de Bruijn graph constructed by an assembler and retrieves ETRs left unassembled. When used with the well-known assembler ABySS, we show that DExTaR is able to obtain high quality results in terms of number and length of the detected ETRs." @default.
- W2025111520 created "2016-06-24" @default.
- W2025111520 creator A5031719973 @default.
- W2025111520 creator A5046031524 @default.
- W2025111520 creator A5048361747 @default.
- W2025111520 creator A5065086988 @default.
- W2025111520 date "2014-11-01" @default.
- W2025111520 modified "2023-10-18" @default.
- W2025111520 title "DExTaR: Detection of exact tandem repeats based on the de Bruijn graph" @default.
- W2025111520 cites W1966822396 @default.
- W2025111520 cites W1972924519 @default.
- W2025111520 cites W2022910024 @default.
- W2025111520 cites W2046137036 @default.
- W2025111520 cites W2058839892 @default.
- W2025111520 cites W2061980860 @default.
- W2025111520 cites W2083342911 @default.
- W2025111520 cites W2091694893 @default.
- W2025111520 cites W2127768708 @default.
- W2025111520 cites W2136651963 @default.
- W2025111520 cites W2139353300 @default.
- W2025111520 cites W2167084861 @default.
- W2025111520 cites W2167719367 @default.
- W2025111520 cites W2168475193 @default.
- W2025111520 doi "https://doi.org/10.1109/bibm.2014.6999134" @default.
- W2025111520 hasPublicationYear "2014" @default.
- W2025111520 type Work @default.
- W2025111520 sameAs 2025111520 @default.
- W2025111520 citedByCount "3" @default.
- W2025111520 countsByYear W20251115202015 @default.
- W2025111520 countsByYear W20251115202020 @default.
- W2025111520 countsByYear W20251115202023 @default.
- W2025111520 crossrefType "proceedings-article" @default.
- W2025111520 hasAuthorship W2025111520A5031719973 @default.
- W2025111520 hasAuthorship W2025111520A5046031524 @default.
- W2025111520 hasAuthorship W2025111520A5048361747 @default.
- W2025111520 hasAuthorship W2025111520A5065086988 @default.
- W2025111520 hasConcept C104317684 @default.
- W2025111520 hasConcept C114614502 @default.
- W2025111520 hasConcept C127413603 @default.
- W2025111520 hasConcept C132525143 @default.
- W2025111520 hasConcept C141231307 @default.
- W2025111520 hasConcept C146978453 @default.
- W2025111520 hasConcept C150194340 @default.
- W2025111520 hasConcept C154945302 @default.
- W2025111520 hasConcept C162317418 @default.
- W2025111520 hasConcept C170320093 @default.
- W2025111520 hasConcept C173801870 @default.
- W2025111520 hasConcept C18949551 @default.
- W2025111520 hasConcept C20218877 @default.
- W2025111520 hasConcept C27149982 @default.
- W2025111520 hasConcept C2777814067 @default.
- W2025111520 hasConcept C33923547 @default.
- W2025111520 hasConcept C41008148 @default.
- W2025111520 hasConcept C54355233 @default.
- W2025111520 hasConcept C70721500 @default.
- W2025111520 hasConcept C80444323 @default.
- W2025111520 hasConcept C86803240 @default.
- W2025111520 hasConceptScore W2025111520C104317684 @default.
- W2025111520 hasConceptScore W2025111520C114614502 @default.
- W2025111520 hasConceptScore W2025111520C127413603 @default.
- W2025111520 hasConceptScore W2025111520C132525143 @default.
- W2025111520 hasConceptScore W2025111520C141231307 @default.
- W2025111520 hasConceptScore W2025111520C146978453 @default.
- W2025111520 hasConceptScore W2025111520C150194340 @default.
- W2025111520 hasConceptScore W2025111520C154945302 @default.
- W2025111520 hasConceptScore W2025111520C162317418 @default.
- W2025111520 hasConceptScore W2025111520C170320093 @default.
- W2025111520 hasConceptScore W2025111520C173801870 @default.
- W2025111520 hasConceptScore W2025111520C18949551 @default.
- W2025111520 hasConceptScore W2025111520C20218877 @default.
- W2025111520 hasConceptScore W2025111520C27149982 @default.
- W2025111520 hasConceptScore W2025111520C2777814067 @default.
- W2025111520 hasConceptScore W2025111520C33923547 @default.
- W2025111520 hasConceptScore W2025111520C41008148 @default.
- W2025111520 hasConceptScore W2025111520C54355233 @default.
- W2025111520 hasConceptScore W2025111520C70721500 @default.
- W2025111520 hasConceptScore W2025111520C80444323 @default.
- W2025111520 hasConceptScore W2025111520C86803240 @default.
- W2025111520 hasLocation W20251115201 @default.
- W2025111520 hasLocation W20251115202 @default.
- W2025111520 hasLocation W20251115203 @default.
- W2025111520 hasOpenAccess W2025111520 @default.
- W2025111520 hasPrimaryLocation W20251115201 @default.
- W2025111520 hasRelatedWork W1964377951 @default.
- W2025111520 hasRelatedWork W1978814852 @default.
- W2025111520 hasRelatedWork W2025111520 @default.
- W2025111520 hasRelatedWork W2109848222 @default.
- W2025111520 hasRelatedWork W2119121014 @default.
- W2025111520 hasRelatedWork W2122316710 @default.
- W2025111520 hasRelatedWork W2151674273 @default.
- W2025111520 hasRelatedWork W2248344430 @default.
- W2025111520 hasRelatedWork W4301429973 @default.
- W2025111520 hasRelatedWork W2951695076 @default.
- W2025111520 isParatext "false" @default.
- W2025111520 isRetracted "false" @default.
- W2025111520 magId "2025111520" @default.
- W2025111520 workType "article" @default.