Matches in SemOpenAlex for { <https://semopenalex.org/work/W2034703713> ?p ?o ?g. }
- W2034703713 endingPage "2342" @default.
- W2034703713 startingPage "2332" @default.
- W2034703713 abstract "Hydropathy plots are often used in place of missing physical data to model transmembrane proteins that are difficult to crystallize. The sequential maxima of their graphs approximate the number and locations of transmembrane segments, but potentially useful additional information about sequential hydrophobic variation is lost in this smoothing procedure. To explore a broader range of hydrophobic variations without loss of the transmembrane segment-relevant sequential maxima, we utilize a sequence of linear decompositions and transformations of the n-length hydrophobic free energy sequences, Hi, i = 1...n, of proteins. Constructions of hydrophobic free energy eigenfunctions, psil, from M-lagged, M x M autocovariance matrices, CM, were followed by their all-poles, maximum entropy power spectral, Somega(psil), and Mexican Hat wavelet, Wa,b(psil), transformations. These procedures yielded graphs indicative of inverse frequencies, omega-1, and sequence locations of hydrophobic modes suggestive of secondary and supersecondary protein structures. The graphs of these computations discriminated between Greek Key, Jelly Role, and Up and Down categories of antiparallel beta-barrel proteins. With these methods, examples of porins, connexins, hexose transporters, nuclear membrane proteins, and potassium but not sodium channels appear to belong to the Up and Down antiparallel beta-barrel variety." @default.
- W2034703713 created "2016-06-24" @default.
- W2034703713 creator A5017754888 @default.
- W2034703713 creator A5046949312 @default.
- W2034703713 creator A5072784821 @default.
- W2034703713 date "1998-11-01" @default.
- W2034703713 modified "2023-10-15" @default.
- W2034703713 title "Hydrophobic Free Energy Eigenfunctions of Pore, Channel, and Transporter Proteins Contain β-Burst Patterns" @default.
- W2034703713 cites W1488248212 @default.
- W2034703713 cites W1544899066 @default.
- W2034703713 cites W1550956677 @default.
- W2034703713 cites W1588000118 @default.
- W2034703713 cites W1598676150 @default.
- W2034703713 cites W1605897306 @default.
- W2034703713 cites W1646522829 @default.
- W2034703713 cites W1968067081 @default.
- W2034703713 cites W1975304761 @default.
- W2034703713 cites W1975964493 @default.
- W2034703713 cites W1989447327 @default.
- W2034703713 cites W1991451992 @default.
- W2034703713 cites W1994340275 @default.
- W2034703713 cites W1996437700 @default.
- W2034703713 cites W1998765195 @default.
- W2034703713 cites W1999048231 @default.
- W2034703713 cites W2000306425 @default.
- W2034703713 cites W2004761096 @default.
- W2034703713 cites W2008174274 @default.
- W2034703713 cites W2008392578 @default.
- W2034703713 cites W2013005355 @default.
- W2034703713 cites W2025612977 @default.
- W2034703713 cites W2029953061 @default.
- W2034703713 cites W2040723368 @default.
- W2034703713 cites W2043023293 @default.
- W2034703713 cites W2044181247 @default.
- W2034703713 cites W2047534626 @default.
- W2034703713 cites W2047840793 @default.
- W2034703713 cites W2050528438 @default.
- W2034703713 cites W2052116640 @default.
- W2034703713 cites W2052721187 @default.
- W2034703713 cites W2053721311 @default.
- W2034703713 cites W2060236046 @default.
- W2034703713 cites W2067397150 @default.
- W2034703713 cites W2070818613 @default.
- W2034703713 cites W2071502955 @default.
- W2034703713 cites W2071868234 @default.
- W2034703713 cites W2072378908 @default.
- W2034703713 cites W2074783201 @default.
- W2034703713 cites W2082488805 @default.
- W2034703713 cites W2087373240 @default.
- W2034703713 cites W2090836513 @default.
- W2034703713 cites W2092289037 @default.
- W2034703713 cites W2094108392 @default.
- W2034703713 cites W2094457043 @default.
- W2034703713 cites W2094734038 @default.
- W2034703713 cites W2094889474 @default.
- W2034703713 cites W2102584369 @default.
- W2034703713 cites W2102882843 @default.
- W2034703713 cites W2105549975 @default.
- W2034703713 cites W2110810808 @default.
- W2034703713 cites W2113403117 @default.
- W2034703713 cites W2132812295 @default.
- W2034703713 cites W2144112248 @default.
- W2034703713 cites W2145315612 @default.
- W2034703713 cites W2159477987 @default.
- W2034703713 cites W2161044805 @default.
- W2034703713 cites W2163101265 @default.
- W2034703713 cites W2173346413 @default.
- W2034703713 cites W2385730221 @default.
- W2034703713 cites W4235678011 @default.
- W2034703713 cites W4296759612 @default.
- W2034703713 doi "https://doi.org/10.1016/s0006-3495(98)77677-5" @default.
- W2034703713 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/1299907" @default.
- W2034703713 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/9788928" @default.
- W2034703713 hasPublicationYear "1998" @default.
- W2034703713 type Work @default.
- W2034703713 sameAs 2034703713 @default.
- W2034703713 citedByCount "16" @default.
- W2034703713 countsByYear W20347037132013 @default.
- W2034703713 crossrefType "journal-article" @default.
- W2034703713 hasAuthorship W2034703713A5017754888 @default.
- W2034703713 hasAuthorship W2034703713A5046949312 @default.
- W2034703713 hasAuthorship W2034703713A5072784821 @default.
- W2034703713 hasBestOaLocation W20347037131 @default.
- W2034703713 hasConcept C115260700 @default.
- W2034703713 hasConcept C121332964 @default.
- W2034703713 hasConcept C142089489 @default.
- W2034703713 hasConcept C170493617 @default.
- W2034703713 hasConcept C185592680 @default.
- W2034703713 hasConcept C24530287 @default.
- W2034703713 hasConcept C55493867 @default.
- W2034703713 hasConcept C62520636 @default.
- W2034703713 hasConcept C8010536 @default.
- W2034703713 hasConceptScore W2034703713C115260700 @default.
- W2034703713 hasConceptScore W2034703713C121332964 @default.
- W2034703713 hasConceptScore W2034703713C142089489 @default.
- W2034703713 hasConceptScore W2034703713C170493617 @default.
- W2034703713 hasConceptScore W2034703713C185592680 @default.
- W2034703713 hasConceptScore W2034703713C24530287 @default.