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• W2037605301 abstract "In this work, we develop an approach to nonequilibrium thermodynamics of an open chemical reaction network in terms of the elementary reaction propensities. The method is akin to the microscopic formulation of the dissipation function in terms of the Kullback-Leibler distance of phase space trajectories in Hamiltonian system. The formalism is applied to a single oligomeric enzyme kinetics at chemiostatic condition that leads the reaction system to a nonequilibrium steady state, characterized by a positive total entropy production rate. Analytical expressions are derived, relating the individual reaction contributions towards the total entropy production rate with experimentally measurable reaction velocity. Taking a real case of Escherichia coli β-galactosidase enzyme obeying Michaelis-Menten kinetics, we thoroughly analyze the temporal as well as the steady state behavior of various thermodynamic quantities for each elementary reaction. This gives a useful insight in the relative magnitudes of various energy terms and the dissipated heat to sustain a steady state of the reaction system operating far-from-equilibrium. It is also observed that, the reaction is entropy-driven at low substrate concentration and becomes energy-driven as the substrate concentration rises." @default.
• W2037605301 created "2016-06-24" @default.
• W2037605301 creator A5028194950 @default.
• W2037605301 creator A5052383329 @default.
• W2037605301 creator A5086881331 @default.
• W2037605301 date "2013-12-26" @default.
• W2037605301 modified "2023-09-26" @default.
• W2037605301 title "Propensity approach to nonequilibrium thermodynamics of a chemical reaction network: Controlling single E-coli β-galactosidase enzyme catalysis through the elementary reaction steps" @default.
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• W2037605301 doi "https://doi.org/10.1063/1.4844195" @default.
• W2037605301 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24387354" @default.
• W2037605301 hasPublicationYear "2013" @default.
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