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• W2038553485 abstract "Cotton is a major fibre crop grown worldwide that suffers extensive damage from chewing insects, including the cotton boll weevil larvae (Anthonomus grandis). Transcriptome analysis was performed to understand the molecular interactions between Gossypium hirsutum L. and cotton boll weevil larvae. The Illumina HiSeq 2000 platform was used to sequence the transcriptome of cotton flower buds infested with boll weevil larvae. The analysis generated a total of 327,489,418 sequence reads that were aligned to the G. hirsutum reference transcriptome. The total number of expressed genes was over 21,697 per sample with an average length of 1,063 bp. The DEGseq analysis identified 443 differentially expressed genes (DEG) in cotton flower buds infected with boll weevil larvae. Among them, 402 (90.7%) were up-regulated, 41 (9.3%) were down-regulated and 432 (97.5%) were identified as orthologues of A. thaliana genes using Blastx. Mapman analysis of DEG indicated that many genes were involved in the biotic stress response spanning a range of functions, from a gene encoding a receptor-like kinase to genes involved in triggering defensive responses such as MAPK, transcription factors (WRKY and ERF) and signalling by ethylene (ET) and jasmonic acid (JA) hormones. Furthermore, the spatial expression pattern of 32 of the genes responsive to boll weevil larvae feeding was determined by “in situ” qPCR analysis from RNA isolated from two flower structures, the stamen and the carpel, by laser microdissection (LMD). A large number of cotton transcripts were significantly altered upon infestation by larvae. Among the changes in gene expression, we highlighted the transcription of receptors/sensors that recognise chitin or insect oral secretions; the altered regulation of transcripts encoding enzymes related to kinase cascades, transcription factors, Ca2+ influxes, and reactive oxygen species; and the modulation of transcripts encoding enzymes from phytohormone signalling pathways. These data will aid in the selection of target genes to genetically engineer cotton to control the cotton boll weevil." @default.
• W2038553485 created "2016-06-24" @default.
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• W2038553485 date "2014-10-04" @default.
• W2038553485 modified "2023-10-06" @default.
• W2038553485 title "Transcriptome analysis of Gossypium hirsutum flower buds infested by cotton boll weevil (Anthonomus grandis) larvae" @default.
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• W2038553485 cites W1592895317 @default.
• W2038553485 cites W1607477758 @default.
• W2038553485 cites W1696199194 @default.
• W2038553485 cites W1968592557 @default.
• W2038553485 cites W1968803817 @default.
• W2038553485 cites W1972991091 @default.
• W2038553485 cites W1974506932 @default.
• W2038553485 cites W1975165380 @default.
• W2038553485 cites W1975331444 @default.
• W2038553485 cites W1980119734 @default.
• W2038553485 cites W1981206019 @default.
• W2038553485 cites W1982579280 @default.
• W2038553485 cites W1986662234 @default.
• W2038553485 cites W1994287266 @default.
• W2038553485 cites W1996363734 @default.
• W2038553485 cites W199703100 @default.
• W2038553485 cites W2004791359 @default.
• W2038553485 cites W2007760066 @default.
• W2038553485 cites W2014956626 @default.
• W2038553485 cites W2022412292 @default.
• W2038553485 cites W2023721784 @default.
• W2038553485 cites W2024836818 @default.
• W2038553485 cites W2028886234 @default.
• W2038553485 cites W2030264283 @default.
• W2038553485 cites W2036422645 @default.
• W2038553485 cites W2044246194 @default.
• W2038553485 cites W2044538627 @default.
• W2038553485 cites W2044565924 @default.
• W2038553485 cites W204732427 @default.
• W2038553485 cites W2051064164 @default.
• W2038553485 cites W2051290095 @default.
• W2038553485 cites W2055770801 @default.
• W2038553485 cites W2059971395 @default.
• W2038553485 cites W2062018285 @default.
• W2038553485 cites W2062555694 @default.
• W2038553485 cites W2067966691 @default.
• W2038553485 cites W2070373373 @default.
• W2038553485 cites W2071698625 @default.
• W2038553485 cites W2071882557 @default.
• W2038553485 cites W2076648283 @default.
• W2038553485 cites W2079487346 @default.
• W2038553485 cites W2079657775 @default.
• W2038553485 cites W2087588737 @default.
• W2038553485 cites W2092122522 @default.
• W2038553485 cites W2094805886 @default.
• W2038553485 cites W2097470338 @default.
• W2038553485 cites W2099249565 @default.
• W2038553485 cites W2101861698 @default.
• W2038553485 cites W2103441770 @default.
• W2038553485 cites W2108277194 @default.
• W2038553485 cites W2108652954 @default.
• W2038553485 cites W2109716770 @default.
• W2038553485 cites W2111211467 @default.
• W2038553485 cites W2114027863 @default.
• W2038553485 cites W2119034410 @default.
• W2038553485 cites W2120024428 @default.
• W2038553485 cites W2120118044 @default.
• W2038553485 cites W2123417207 @default.
• W2038553485 cites W2129442808 @default.
• W2038553485 cites W2130653153 @default.
• W2038553485 cites W2132632499 @default.
• W2038553485 cites W2133776417 @default.
• W2038553485 cites W2135257044 @default.
• W2038553485 cites W2141458291 @default.
• W2038553485 cites W2145091349 @default.
• W2038553485 cites W2147863419 @default.
• W2038553485 cites W2155932116 @default.
• W2038553485 cites W2156173046 @default.
• W2038553485 cites W2158057912 @default.
• W2038553485 cites W2158581601 @default.
• W2038553485 cites W2160525528 @default.
• W2038553485 cites W2161106528 @default.
• W2038553485 cites W2162515800 @default.
• W2038553485 cites W2164154943 @default.
• W2038553485 cites W2164945218 @default.
• W2038553485 cites W2167894564 @default.
• W2038553485 cites W2169562034 @default.
• W2038553485 cites W2170117443 @default.
• W2038553485 cites W2170402252 @default.
• W2038553485 cites W2170613743 @default.
• W2038553485 doi "https://doi.org/10.1186/1471-2164-15-854" @default.
• W2038553485 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4234063" @default.
• W2038553485 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/25280771" @default.
• W2038553485 hasPublicationYear "2014" @default.
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