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- W2040217848 abstract "A soft IP core, expressed in parametric VHDL, has been developed and used to synthesize different multiprocessor Systems on Chip (SoCs) for the stochastic simulation of large-size biochemical reaction networks based on Gillespie's First Reaction Method (FRM). The SoCs can be configured to have up to N=8 Processing Elements and simulate efficiently in hardware biomolecular networks with up to m=16K reactions. The FPGA implementations of the SoCs are communicating with a host PC via the serial and Ethernet ports for control and data transmission respectively. When mapped to a Virtex-5 Xilinx FPGA the FRM SoCs can deliver simulation performance (in Mega-Reactions/sec) that may exceed by up to two orders of magnitude the performance of well known software simulators running on fast PCs." @default.
- W2040217848 created "2016-06-24" @default.
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- W2040217848 date "2012-12-01" @default.
- W2040217848 modified "2023-09-25" @default.
- W2040217848 title "A soft IP core generating SoCs for the efficient stochastic simulation of large Biomolecular Networks using FPGAs" @default.
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- W2040217848 doi "https://doi.org/10.1109/icecs.2012.6463795" @default.
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