Matches in SemOpenAlex for { <https://semopenalex.org/work/W2046603707> ?p ?o ?g. }
- W2046603707 endingPage "e81033" @default.
- W2046603707 startingPage "e81033" @default.
- W2046603707 abstract "Fungi of the genus Pycnoporus are white-rot basidiomycetes widely studied because of their ability to synthesize high added-value compounds and enzymes of industrial interest. Here we report the sequencing, assembly and analysis of the transcriptome of Pycnoporus sanguineus BAFC 2126 grown at stationary phase, in media supplemented with copper sulfate. Using the 454 pyrosequencing platform we obtained a total of 226,336 reads (88,779,843 bases) that were filtered and de novo assembled to generate a reference transcriptome of 7,303 transcripts. Putative functions were assigned for 4,732 transcripts by searching similarities of six-frame translated sequences against a customized protein database and by the presence of conserved protein domains. Through the analysis of translated sequences we identified transcripts encoding 178 putative carbohydrate active enzymes, including representatives of 15 families with roles in lignocellulose degradation. Furthermore, we found many transcripts encoding enzymes related to lignin hydrolysis and modification, including laccases and peroxidases, as well as GMC oxidoreductases, copper radical oxidases and other enzymes involved in the generation of extracellular hydrogen peroxide and iron homeostasis. Finally, we identified the transcripts encoding all of the enzymes involved in terpenoid backbone biosynthesis pathway, various terpene synthases related to the biosynthesis of sesquiterpenoids and triterpenoids precursors, and also cytochrome P450 monooxygenases, glutathione S-transferases and epoxide hydrolases with potential functions in the biodegradation of xenobiotics and the enantioselective biosynthesis of biologically active drugs. To our knowledge this is the first report of a transcriptome of genus Pycnoporus and a resource for future molecular studies in P. sanguineus." @default.
- W2046603707 created "2016-06-24" @default.
- W2046603707 creator A5002290690 @default.
- W2046603707 creator A5039106428 @default.
- W2046603707 creator A5065844571 @default.
- W2046603707 creator A5089234135 @default.
- W2046603707 date "2013-12-02" @default.
- W2046603707 modified "2023-10-16" @default.
- W2046603707 title "A First Insight into Pycnoporus sanguineus BAFC 2126 Transcriptome" @default.
- W2046603707 cites W1507254226 @default.
- W2046603707 cites W1521349197 @default.
- W2046603707 cites W1623035322 @default.
- W2046603707 cites W1925046886 @default.
- W2046603707 cites W1963981965 @default.
- W2046603707 cites W1967034374 @default.
- W2046603707 cites W1967796434 @default.
- W2046603707 cites W1972165536 @default.
- W2046603707 cites W1973047225 @default.
- W2046603707 cites W1973561696 @default.
- W2046603707 cites W1978898887 @default.
- W2046603707 cites W1979531270 @default.
- W2046603707 cites W1979870045 @default.
- W2046603707 cites W1982390665 @default.
- W2046603707 cites W1982708190 @default.
- W2046603707 cites W1985406759 @default.
- W2046603707 cites W1988199321 @default.
- W2046603707 cites W1990070941 @default.
- W2046603707 cites W1990102720 @default.
- W2046603707 cites W1992162772 @default.
- W2046603707 cites W1996744678 @default.
- W2046603707 cites W1996974192 @default.
- W2046603707 cites W1998685667 @default.
- W2046603707 cites W1999569531 @default.
- W2046603707 cites W2003212340 @default.
- W2046603707 cites W2004541539 @default.
- W2046603707 cites W2004669425 @default.
- W2046603707 cites W2007958980 @default.
- W2046603707 cites W2013648413 @default.
- W2046603707 cites W2017549153 @default.
- W2046603707 cites W2022432353 @default.
- W2046603707 cites W2024077087 @default.
- W2046603707 cites W2024979637 @default.
- W2046603707 cites W2027904700 @default.
- W2046603707 cites W2030784415 @default.
- W2046603707 cites W2032553790 @default.
- W2046603707 cites W2033303128 @default.
- W2046603707 cites W2041287140 @default.
- W2046603707 cites W2044207871 @default.
- W2046603707 cites W2044930768 @default.
- W2046603707 cites W2049007935 @default.
- W2046603707 cites W2049400911 @default.
- W2046603707 cites W2054142654 @default.
- W2046603707 cites W2063079650 @default.
- W2046603707 cites W2066273154 @default.
- W2046603707 cites W2066806843 @default.
- W2046603707 cites W2068454143 @default.
- W2046603707 cites W2072431472 @default.
- W2046603707 cites W2073254834 @default.
- W2046603707 cites W2080595183 @default.
- W2046603707 cites W2083985111 @default.
- W2046603707 cites W2090790079 @default.
- W2046603707 cites W2091591204 @default.
- W2046603707 cites W2091704708 @default.
- W2046603707 cites W2091971903 @default.
- W2046603707 cites W2098356410 @default.
- W2046603707 cites W2098740721 @default.
- W2046603707 cites W2100450322 @default.
- W2046603707 cites W2103896911 @default.
- W2046603707 cites W2108105119 @default.
- W2046603707 cites W2108166985 @default.
- W2046603707 cites W2110330154 @default.
- W2046603707 cites W2114423361 @default.
- W2046603707 cites W2118067388 @default.
- W2046603707 cites W2122900876 @default.
- W2046603707 cites W2129577900 @default.
- W2046603707 cites W2130695937 @default.
- W2046603707 cites W2131168694 @default.
- W2046603707 cites W2132583370 @default.
- W2046603707 cites W2133579817 @default.
- W2046603707 cites W2141367747 @default.
- W2046603707 cites W2142087914 @default.
- W2046603707 cites W2142097673 @default.
- W2046603707 cites W2142587131 @default.
- W2046603707 cites W2144479163 @default.
- W2046603707 cites W2150227862 @default.
- W2046603707 cites W2150874975 @default.
- W2046603707 cites W2152727526 @default.
- W2046603707 cites W2155632794 @default.
- W2046603707 cites W2160051628 @default.
- W2046603707 cites W2161244119 @default.
- W2046603707 cites W2164154943 @default.
- W2046603707 cites W2165193399 @default.
- W2046603707 cites W2165876708 @default.
- W2046603707 cites W2168506412 @default.
- W2046603707 cites W2189780307 @default.
- W2046603707 cites W335690363 @default.
- W2046603707 cites W4232427180 @default.
- W2046603707 cites W4237887594 @default.