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- W2047395587 abstract "We have solved the single crystal X-ray structure of the synthetic DNA hexamer d(CCGCGG). The central alternating tetramer forms a Z-DNA duplex. The initial cytosine of each strand of the duplex swings out and forms a Watson-Crick base-pair with the terminal guanine of a symmetry-related molecule. Thus, two symmetry-related DNA molecules form a twin with intermolecular base-pairs at both ends. Such a Twin is additionally stabilized by a sodium ion located on a dyad axis between two DNA duplexes. The total structure has recombination-like features. It also provides a model for B/Z junctions. The crystal used in this study belongs to space group C 2221 with a = 34·33 Å, b = 44·4 Å and c = 38·27 Å. The structure was solved by molecular replacement using partial models, and refined by molecular dynamics simulated annealing and positional treatment. The refinement has been concluded with an R-factor of 18·5% for 2377 reflections with F⩾2σ (F) in the resolution region 8.0 to 1.92 Å. The asymmetric unit contains two strands of d(CCGCGG) and 38 water molecules." @default.
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- W2047395587 date "1994-10-01" @default.
- W2047395587 modified "2023-10-17" @default.
- W2047395587 title "Recombination-like Structure of d(CCGCGG)" @default.
- W2047395587 doi "https://doi.org/10.1006/jmbi.1994.1674" @default.
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