FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2052300514> ?p ?o ?g. }

• W2052300514 endingPage "479" @default.
• W2052300514 startingPage "469" @default.
• W2052300514 abstract "Lectins display a variety of strategies for specific recognition of carbohydrates. In several lectin families from different origin, one or two calcium ions are involved in the carbohydrate binding site with direct coordination of the sugar hydroxyl groups. Our work implied a molecular docking study involving a set of bacterial and animal calcium-dependant lectins in order to compare the ability of three docking programs to reproduce key carbohydrate-metal interactions. Flexible docking was performed using AutoDock, DOCK and Grid-based Ligand Docking with Energetics (GLIDE) softwares. All docking packages were almost able to predict the carbohydrate binding orientations but not in every instance the result was obvious to evaluate. DOCK showed good results according to crystallographic information but not in all tested cases the lowest energy conformation identified the experimental data. GLIDE presented the same difficulty in result analysis but the lowest energy pose was always a satisfactory solution, able to mimic the real carbohydrate orientation. AutoDock showed a reasonable accuracy in sugar orientation prediction based on docking cluster number ranking and most accurate distances between calcium and sugar hydroxyl groups. The latest program and GLIDE were used to predict the Gal and GalNAc binding mode in sea cucumber CEL-III, a new calcium-dependent lectin, that displays haemolytic and cytotoxic properties." @default.
• W2052300514 created "2016-06-24" @default.
• W2052300514 creator A5011354227 @default.
• W2052300514 creator A5072318876 @default.
• W2052300514 creator A5083099713 @default.
• W2052300514 date "2008-04-01" @default.
• W2052300514 modified "2023-09-25" @default.
• W2052300514 title "Comparison of docking methods for carbohydrate binding in calcium-dependent lectins and prediction of the carbohydrate binding mode to sea cucumber lectin CEL-III" @default.
• W2052300514 cites W1494998127 @default.
• W2052300514 cites W1974465830 @default.
• W2052300514 cites W1985588649 @default.
• W2052300514 cites W2001291135 @default.
• W2052300514 cites W2009423060 @default.
• W2052300514 cites W2014529628 @default.
• W2052300514 cites W2015688756 @default.
• W2052300514 cites W2032946695 @default.
• W2052300514 cites W2055800251 @default.
• W2052300514 cites W2055997032 @default.
• W2052300514 cites W2056179306 @default.
• W2052300514 cites W2057568023 @default.
• W2052300514 cites W2062486325 @default.
• W2052300514 cites W2076111323 @default.
• W2052300514 cites W2082081313 @default.
• W2052300514 cites W2083363718 @default.
• W2052300514 cites W2084598167 @default.
• W2052300514 cites W2086787941 @default.
• W2052300514 cites W2111767148 @default.
• W2052300514 cites W2120095412 @default.
• W2052300514 cites W2122199548 @default.
• W2052300514 cites W2123859926 @default.
• W2052300514 cites W2130479394 @default.
• W2052300514 cites W2132629607 @default.
• W2052300514 cites W2139406125 @default.
• W2052300514 cites W2142032878 @default.
• W2052300514 cites W2147993766 @default.
• W2052300514 cites W2158534713 @default.
• W2052300514 cites W2161239029 @default.
• W2052300514 cites W2171074980 @default.
• W2052300514 cites W2173015905 @default.
• W2052300514 cites W2337120805 @default.
• W2052300514 cites W2402088633 @default.
• W2052300514 cites W2404509628 @default.
• W2052300514 cites W2951428058 @default.
• W2052300514 cites W4239828048 @default.
• W2052300514 cites W946613167 @default.
• W2052300514 doi "https://doi.org/10.1080/08927020701697709" @default.
• W2052300514 hasPublicationYear "2008" @default.
• W2052300514 type Work @default.
• W2052300514 sameAs 2052300514 @default.
• W2052300514 citedByCount "28" @default.
• W2052300514 countsByYear W20523005142012 @default.
• W2052300514 countsByYear W20523005142013 @default.
• W2052300514 countsByYear W20523005142014 @default.
• W2052300514 countsByYear W20523005142015 @default.
• W2052300514 countsByYear W20523005142016 @default.
• W2052300514 countsByYear W20523005142018 @default.
• W2052300514 countsByYear W20523005142019 @default.
• W2052300514 countsByYear W20523005142021 @default.
• W2052300514 countsByYear W20523005142023 @default.
• W2052300514 crossrefType "journal-article" @default.
• W2052300514 hasAuthorship W2052300514A5011354227 @default.
• W2052300514 hasAuthorship W2052300514A5072318876 @default.
• W2052300514 hasAuthorship W2052300514A5083099713 @default.
• W2052300514 hasBestOaLocation W20523005144 @default.
• W2052300514 hasConcept C103697762 @default.
• W2052300514 hasConcept C104317684 @default.
• W2052300514 hasConcept C147597530 @default.
• W2052300514 hasConcept C159110408 @default.
• W2052300514 hasConcept C178790620 @default.
• W2052300514 hasConcept C185592680 @default.
• W2052300514 hasConcept C2775905019 @default.
• W2052300514 hasConcept C2778977261 @default.
• W2052300514 hasConcept C2780152424 @default.
• W2052300514 hasConcept C2780758401 @default.
• W2052300514 hasConcept C41685203 @default.
• W2052300514 hasConcept C519063684 @default.
• W2052300514 hasConcept C55493867 @default.
• W2052300514 hasConcept C59593255 @default.
• W2052300514 hasConcept C71240020 @default.
• W2052300514 hasConcept C71924100 @default.
• W2052300514 hasConcept C77319485 @default.
• W2052300514 hasConcept C8010536 @default.
• W2052300514 hasConcept C93073132 @default.
• W2052300514 hasConceptScore W2052300514C103697762 @default.
• W2052300514 hasConceptScore W2052300514C104317684 @default.
• W2052300514 hasConceptScore W2052300514C147597530 @default.
• W2052300514 hasConceptScore W2052300514C159110408 @default.
• W2052300514 hasConceptScore W2052300514C178790620 @default.
• W2052300514 hasConceptScore W2052300514C185592680 @default.
• W2052300514 hasConceptScore W2052300514C2775905019 @default.
• W2052300514 hasConceptScore W2052300514C2778977261 @default.
• W2052300514 hasConceptScore W2052300514C2780152424 @default.
• W2052300514 hasConceptScore W2052300514C2780758401 @default.
• W2052300514 hasConceptScore W2052300514C41685203 @default.
• W2052300514 hasConceptScore W2052300514C519063684 @default.
• W2052300514 hasConceptScore W2052300514C55493867 @default.
• W2052300514 hasConceptScore W2052300514C59593255 @default.
• W2052300514 hasConceptScore W2052300514C71240020 @default.

• next