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• W2062179619 endingPage "e79353" @default.
• W2062179619 startingPage "e79353" @default.
• W2062179619 abstract "With increasing number of novel bacteria being isolated from the human gut ecosystem, there is a greater need to study their role in the gut ecosystem and their effect on the host health. In the present study, we carried out in silico genome-wide analysis of two novel Megasphaera sp. isolates NM10 (DSM25563) and BL7 (DSM25562), isolated from feces of two healthy individuals and validated the key features by in vitro studies. The analysis revealed the general metabolic potential, adaptive features and the potential effects of these isolates on the host. The comparative genome analysis of the two human gut isolates NM10 and BL7 with ruminal isolate Megasphaera elsdenii (DSM20460) highlighted the differential adaptive features for their survival in human gut. The key findings include features like bile resistance, presence of various sensory and regulatory systems, stress response systems, membrane transporters and resistance to antibiotics. Comparison of the glycobiome based on the genomes of the ruminal isolate with the human gut isolates NM10 and BL revealed the presence of diverse and unique sets of Carbohydrate-Active enzymes (CAZymes) amongst these isolates, with a higher collection of CAZymes in the human gut isolates. This could be attributed to the difference in host diet and thereby the environment, consequently suggesting host specific adaptation in these isolates. In silico analysis of metabolic potential predicted the ability of these isolates to produce important metabolites like short chain fatty acids (butyrate, acetate, formate, and caproate), vitamins and essential amino acids, which was further validated by in vitro experiments. The ability of these isolates to produce important metabolites advocates for a potential healthy influence on the host. Further in vivo studies including transcriptomic and proteomic analysis will be required for better understanding the role and impact of these Megasphaera sp. isolates NM10 and BL7 on the human host." @default.
• W2062179619 created "2016-06-24" @default.
• W2062179619 creator A5014776360 @default.
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• W2062179619 date "2013-11-18" @default.
• W2062179619 modified "2023-10-03" @default.
• W2062179619 title "Comparative Genome Analysis of Megasphaera sp. Reveals Niche Specialization and Its Potential Role in the Human Gut" @default.
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• W2062179619 doi "https://doi.org/10.1371/journal.pone.0079353" @default.
• W2062179619 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3832451" @default.
• W2062179619 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24260205" @default.
• W2062179619 hasPublicationYear "2013" @default.
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