FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2075325677> ?p ?o ?g. }

• W2075325677 abstract "Abstract The Systems Biology Graphical Notation - SBGN [1] provides a standard for the visual representation of biochemical and cellular processes. SBGN aims to improve information exchange and to support the collaborative creation of large maps based on individual modules. The language contains three views of biological processes covering different levels of detail:(1) Process Description (PD): this sublanguage provides a detailed presentation of the temporal dependencies of biological interactions in a network;(2) Entity Relationship (ER): this sublanguage displays the relationships in which a given entity can participate in a network; and(3) Activity Flow (AF): this sublanguage shows the flow of information between biological entities in an abstract way.SBGN aims to support a more efficient and accurate communication of biological knowledge between different research communities. However, to increase its usage, tools for editing, validating, layouting and translating SBGN maps are desirable.We present novel developments in SBGN-ED [2], a tool which allows the creation of all three types of SBGN maps from scratch or the editing of existing maps, the validation of these maps for syntactical and semantical correctness, the translation of networks from databases such as KEGG into SBGN and the export of SBGN maps into several file and image formats. SBGN-ED is based on the Vanted system [3] for the integration, analysis and visualisation of experimental data within biological networks and functional hierarchies. We furthermore present some applications based on SBGN-ED such as RIMAS [4].SBGN-ED is freely available from http://www.sbgn-ed.org. The web site contains also tutorials and example files.[1] N. Le Novère et al. (2009) The systems biology graphical notation. Nature Biotechnology, 27: 735–741.[2] B.H. Junker, C. Klukas and F. Schreiber (2006) VANTED: a system for advanced data analysis and visualization in the context of biological networks. BMC Bioinformatics, 7: 109.1–109.13.[3] T. Czauderna, C. Klukas and F. Schreiber (2010) Editing, validating, and translating of SBGN maps. Bioinformatics, 26(18): 2340-2341.[3] A. Junker, A. Hartmann, F. Schreiber, H. Bäumlein (2010) An engineers view on regulation of seed development. Trends in Plant Science 15(6): 303-307." @default.
• W2075325677 created "2016-06-24" @default.
• W2075325677 creator A5003441276 @default.
• W2075325677 creator A5035416919 @default.
• W2075325677 date "2011-09-21" @default.
• W2075325677 modified "2023-10-16" @default.
• W2075325677 title "SBGN-ED – working with the Systems Biology Graphical Notation" @default.
• W2075325677 doi "https://doi.org/10.1038/npre.2011.6445.1" @default.
• W2075325677 hasPublicationYear "2011" @default.
• W2075325677 type Work @default.
• W2075325677 sameAs 2075325677 @default.
• W2075325677 citedByCount "0" @default.
• W2075325677 crossrefType "journal-article" @default.
• W2075325677 hasAuthorship W2075325677A5003441276 @default.
• W2075325677 hasAuthorship W2075325677A5035416919 @default.
• W2075325677 hasBestOaLocation W20753256771 @default.
• W2075325677 hasConcept C103593891 @default.
• W2075325677 hasConcept C145644426 @default.
• W2075325677 hasConcept C148840519 @default.
• W2075325677 hasConcept C154945302 @default.
• W2075325677 hasConcept C199360897 @default.
• W2075325677 hasConcept C23123220 @default.
• W2075325677 hasConcept C2776411971 @default.
• W2075325677 hasConcept C2777904410 @default.
• W2075325677 hasConcept C41008148 @default.
• W2075325677 hasConcept C55439883 @default.
• W2075325677 hasConceptScore W2075325677C103593891 @default.
• W2075325677 hasConceptScore W2075325677C145644426 @default.
• W2075325677 hasConceptScore W2075325677C148840519 @default.
• W2075325677 hasConceptScore W2075325677C154945302 @default.
• W2075325677 hasConceptScore W2075325677C199360897 @default.
• W2075325677 hasConceptScore W2075325677C23123220 @default.
• W2075325677 hasConceptScore W2075325677C2776411971 @default.
• W2075325677 hasConceptScore W2075325677C2777904410 @default.
• W2075325677 hasConceptScore W2075325677C41008148 @default.
• W2075325677 hasConceptScore W2075325677C55439883 @default.
• W2075325677 hasLocation W20753256771 @default.
• W2075325677 hasOpenAccess W2075325677 @default.
• W2075325677 hasPrimaryLocation W20753256771 @default.
• W2075325677 hasRelatedWork W1496874200 @default.
• W2075325677 hasRelatedWork W1522191941 @default.
• W2075325677 hasRelatedWork W1578256315 @default.
• W2075325677 hasRelatedWork W2072806201 @default.
• W2075325677 hasRelatedWork W2116120329 @default.
• W2075325677 hasRelatedWork W2295033459 @default.
• W2075325677 hasRelatedWork W2404327427 @default.
• W2075325677 hasRelatedWork W4238823939 @default.
• W2075325677 hasRelatedWork W598950423 @default.
• W2075325677 hasRelatedWork W2789178056 @default.
• W2075325677 isParatext "false" @default.
• W2075325677 isRetracted "false" @default.
• W2075325677 magId "2075325677" @default.
• W2075325677 workType "article" @default.