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• W2076175048 abstract "In this paper we present a sampling framework for RNA structures of fixed topological genus. We introduce a novel, linear time, uniform sampling algorithm for RNA structures of fixed topological genus g, for arbitrary g>0. Furthermore we develop a linear time sampling algorithm for RNA structures of fixed topological genus g that are weighted by a simplified, loop-based energy functional. For this process the partition function of the energy functional has to be computed once, which has O(n(2)) time complexity." @default.
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• W2076175048 date "2013-10-01" @default.
• W2076175048 modified "2023-09-29" @default.
• W2076175048 title "Generation of RNA pseudoknot structures with topological genus filtration" @default.
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• W2076175048 doi "https://doi.org/10.1016/j.mbs.2013.07.014" @default.
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