Matches in SemOpenAlex for { <https://semopenalex.org/work/W2076453552> ?p ?o ?g. }
- W2076453552 endingPage "1533" @default.
- W2076453552 startingPage "1522" @default.
- W2076453552 abstract "Most of the lineages of bacteria have remained unknown beyond environmental surveys using molecular markers. Until the recent characterisation of several strains, the phylum Armatimonadetes (formerly known as ‘candidate division OP10’) was a dominant and globally-distributed lineage within this ‘uncultured majority’. Here we report the first Armatimonadetes genome from the thermophile Chthonomonas calidirosea T49T and its role as a saccharide scavenger in a geothermal steam-affected soil environment. Phylogenomic analysis indicates T49T to be related closely to the phylum Chloroflexi. The predicted genes encoding for carbohydrate transporters (27 carbohydrate ATP-binding cassette transporter-related genes) and carbohydrate-metabolising enzymes (including at least 55 putative enzymes with glycosyl hydrolase domains) within the 3.43 Mb genome help explain its ability to utilise a wide range of carbohydrates as well as its inability to break down extracellular cellulose. The presence of only a single class of branched amino acid transporter appears to be the causative step for the requirement of isoleucine for growth. The genome lacks many commonly conserved operons (for example, lac and trp). Potential causes for this, such as dispersion of functionally related genes via horizontal gene transfer from distant taxa or recent genome recombination, were rejected. Evidence suggests T49T relies on the relatively abundant σ-factors, instead of operonic organisation, as the primary means of transcriptional regulation. Examination of the genome with physiological data and environmental dynamics (including interspecific interactions) reveals ecological factors behind the apparent elusiveness of T49T to cultivation and, by extension, the remaining ‘uncultured majority’ that have so far evaded conventional microbiological techniques." @default.
- W2076453552 created "2016-06-24" @default.
- W2076453552 creator A5001974222 @default.
- W2076453552 creator A5017874905 @default.
- W2076453552 creator A5024215941 @default.
- W2076453552 creator A5029718330 @default.
- W2076453552 creator A5053224665 @default.
- W2076453552 creator A5085249696 @default.
- W2076453552 date "2014-01-30" @default.
- W2076453552 modified "2023-10-15" @default.
- W2076453552 title "Genomic analysis of Chthonomonas calidirosea, the first sequenced isolate of the phylum Armatimonadetes" @default.
- W2076453552 cites W1490137556 @default.
- W2076453552 cites W1506947350 @default.
- W2076453552 cites W1553112231 @default.
- W2076453552 cites W1571225029 @default.
- W2076453552 cites W1857724861 @default.
- W2076453552 cites W1947577558 @default.
- W2076453552 cites W1970860748 @default.
- W2076453552 cites W1974873176 @default.
- W2076453552 cites W1979841837 @default.
- W2076453552 cites W1991497480 @default.
- W2076453552 cites W1998783353 @default.
- W2076453552 cites W2001002058 @default.
- W2076453552 cites W2003632243 @default.
- W2076453552 cites W2004181413 @default.
- W2076453552 cites W2011344348 @default.
- W2076453552 cites W2012960603 @default.
- W2076453552 cites W2015898876 @default.
- W2076453552 cites W2019547869 @default.
- W2076453552 cites W2031611770 @default.
- W2076453552 cites W2034622495 @default.
- W2076453552 cites W2035840156 @default.
- W2076453552 cites W2040400164 @default.
- W2076453552 cites W2042045767 @default.
- W2076453552 cites W2042119041 @default.
- W2076453552 cites W2045745647 @default.
- W2076453552 cites W2052792930 @default.
- W2076453552 cites W2056568233 @default.
- W2076453552 cites W2058982051 @default.
- W2076453552 cites W2064853198 @default.
- W2076453552 cites W2066915800 @default.
- W2076453552 cites W2080347313 @default.
- W2076453552 cites W2089859322 @default.
- W2076453552 cites W2091232725 @default.
- W2076453552 cites W2091922579 @default.
- W2076453552 cites W2095909724 @default.
- W2076453552 cites W2098839738 @default.
- W2076453552 cites W2099920204 @default.
- W2076453552 cites W2104992237 @default.
- W2076453552 cites W2106020100 @default.
- W2076453552 cites W2106665579 @default.
- W2076453552 cites W2108228587 @default.
- W2076453552 cites W2108473040 @default.
- W2076453552 cites W2108929776 @default.
- W2076453552 cites W2109213168 @default.
- W2076453552 cites W2112956791 @default.
- W2076453552 cites W2115263958 @default.
- W2076453552 cites W2116354979 @default.
- W2076453552 cites W2116913446 @default.
- W2076453552 cites W2118001436 @default.
- W2076453552 cites W2118342782 @default.
- W2076453552 cites W2124351063 @default.
- W2076453552 cites W2127660113 @default.
- W2076453552 cites W2132630443 @default.
- W2076453552 cites W2132926880 @default.
- W2076453552 cites W2134153749 @default.
- W2076453552 cites W2137639237 @default.
- W2076453552 cites W2137721714 @default.
- W2076453552 cites W2139627484 @default.
- W2076453552 cites W2139931023 @default.
- W2076453552 cites W2155606054 @default.
- W2076453552 cites W2157765009 @default.
- W2076453552 cites W2162758151 @default.
- W2076453552 cites W2163169737 @default.
- W2076453552 cites W2167090382 @default.
- W2076453552 cites W2167877584 @default.
- W2076453552 cites W4237293127 @default.
- W2076453552 doi "https://doi.org/10.1038/ismej.2013.251" @default.
- W2076453552 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4069393" @default.
- W2076453552 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24477196" @default.
- W2076453552 hasPublicationYear "2014" @default.
- W2076453552 type Work @default.
- W2076453552 sameAs 2076453552 @default.
- W2076453552 citedByCount "35" @default.
- W2076453552 countsByYear W20764535522014 @default.
- W2076453552 countsByYear W20764535522015 @default.
- W2076453552 countsByYear W20764535522016 @default.
- W2076453552 countsByYear W20764535522017 @default.
- W2076453552 countsByYear W20764535522018 @default.
- W2076453552 countsByYear W20764535522019 @default.
- W2076453552 countsByYear W20764535522020 @default.
- W2076453552 countsByYear W20764535522021 @default.
- W2076453552 countsByYear W20764535522022 @default.
- W2076453552 countsByYear W20764535522023 @default.
- W2076453552 crossrefType "journal-article" @default.
- W2076453552 hasAuthorship W2076453552A5001974222 @default.
- W2076453552 hasAuthorship W2076453552A5017874905 @default.
- W2076453552 hasAuthorship W2076453552A5024215941 @default.