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• W2079603008 abstract "Background Due to the increased accuracy of Copy Number Variable region (CNV) break point mapping, it is now possible to say with a reasonable degree of confidence whether a gene (i) falls entirely within a CNV; (ii) overlaps the CNV or (iii) actually contains the CNV. We classify these as type I, II and III CNV genes respectively. Principal Findings Here we show that although type I genes vary in copy number along with the CNV, most of these type I genes have the same expression levels as wild type copy numbers of the gene. These genes must, therefore, be under homeostatic dosage compensation control. Looking into possible mechanisms for the regulation of gene expression we found that type I genes have a significant paucity of genes regulated by miRNAs and are not significantly enriched for monoallelically expressed genes. Type III genes, on the other hand, have a significant excess of genes regulated by miRNAs and are enriched for genes that are monoallelically expressed. Significance Many diseases and genomic disorders are associated with CNVs so a better understanding of the different ways genes are associated with normal CNVs will help focus on candidate genes in genome wide association studies." @default.
• W2079603008 created "2016-06-24" @default.
• W2079603008 creator A5043001147 @default.
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• W2079603008 date "2011-05-26" @default.
• W2079603008 modified "2023-09-23" @default.
• W2079603008 title "The Characterisation of Three Types of Genes that Overlie Copy Number Variable Regions" @default.
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• W2079603008 doi "https://doi.org/10.1371/journal.pone.0014814" @default.
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