FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2086032907> ?p ?o ?g. }

• W2086032907 endingPage "e0122967" @default.
• W2086032907 startingPage "e0122967" @default.
• W2086032907 abstract "The Yesso scallop Patinopecten yessoensis is an economically important marine bivalve species in aquaculture and fishery in Asian countries. However, limited genomic resources are available for this scallop, which hampers investigations into molecular mechanisms underlying their unique biological characteristics, such as shell formation and pigmentation. Mantle is the special tissue of P. yessoensis that secretes biomineralization proteins inducing shell deposition as well as pigmentation on the shells. However, a current deficiency of transcriptome information limits insight into mechanisms of shell formation and pigmentation in this species. In this study, the transcriptome of the mantle of P. yessoensis was deeply sequenced and characterized using Illumina RNA-seq technology. A total of 86,521 unique transcripts are assembled from 55,884,122 reads that passed quality filters, and annotated, using Gene Ontology classification. A total of 259 pathways are identified in the mantle transcriptome, including the calcium signaling and melanogenesis pathways. A total of 237 unigenes that are homologous to 102 reported biomineralization genes are identified, and 121 unigenes that are homologous to 93 known proteins related to melanin biosynthesis are found. Twenty-three annotated unigenes, which are mainly homologous to calmodulin and related proteins, Ca2+/calmodulin-dependent protein kinase, adenylate/guanylate cyclase, and tyrosinase family are potentially involved in both biomineralization and melanin biosynthesis. It is suggested that these genes are probably not limited in function to induce shell deposition by calcium metabolism, but may also be involved in pigmentation of the shells of the scallop. This potentially supports the idea that there might be a link between calcium metabolism and melanin biosynthesis, which was previously found in vertebrates. The findings presented here will notably advance the understanding of the sophisticated processes of shell formation as well as shell pigmentation in P. yessoensis and other bivalve species, and also provide new evidence on gene expression for the understanding of pigmentation and biomineralization not only in invertebrates but also probably in vertebrates." @default.
• W2086032907 created "2016-06-24" @default.
• W2086032907 creator A5008336179 @default.
• W2086032907 creator A5037228497 @default.
• W2086032907 creator A5072766650 @default.
• W2086032907 creator A5078197541 @default.
• W2086032907 creator A5080718420 @default.
• W2086032907 date "2015-04-09" @default.
• W2086032907 modified "2023-10-16" @default.
• W2086032907 title "Characterization of the Mantle Transcriptome of Yesso Scallop (Patinopecten yessoensis): Identification of Genes Potentially Involved in Biomineralization and Pigmentation" @default.
• W2086032907 cites W109937300 @default.
• W2086032907 cites W1522733162 @default.
• W2086032907 cites W1554087234 @default.
• W2086032907 cites W1877751022 @default.
• W2086032907 cites W1966428938 @default.
• W2086032907 cites W1967158473 @default.
• W2086032907 cites W1968420547 @default.
• W2086032907 cites W1981509058 @default.
• W2086032907 cites W1981648501 @default.
• W2086032907 cites W1989025984 @default.
• W2086032907 cites W1989792193 @default.
• W2086032907 cites W1990005278 @default.
• W2086032907 cites W1990035812 @default.
• W2086032907 cites W1990162855 @default.
• W2086032907 cites W1991731239 @default.
• W2086032907 cites W1994305142 @default.
• W2086032907 cites W1995877471 @default.
• W2086032907 cites W1996497488 @default.
• W2086032907 cites W1998159224 @default.
• W2086032907 cites W1999810095 @default.
• W2086032907 cites W2001135454 @default.
• W2086032907 cites W2002898602 @default.
• W2086032907 cites W2007318995 @default.
• W2086032907 cites W2009091242 @default.
• W2086032907 cites W2010424836 @default.
• W2086032907 cites W2010809008 @default.
• W2086032907 cites W2012189261 @default.
• W2086032907 cites W2017937709 @default.
• W2086032907 cites W2023238257 @default.
• W2086032907 cites W2024832968 @default.
• W2086032907 cites W2026345779 @default.
• W2086032907 cites W2029169169 @default.
• W2086032907 cites W2030009739 @default.
• W2086032907 cites W2031942465 @default.
• W2086032907 cites W2032678114 @default.
• W2086032907 cites W2034911186 @default.
• W2086032907 cites W2037951645 @default.
• W2086032907 cites W2040100879 @default.
• W2086032907 cites W2043584813 @default.
• W2086032907 cites W2045670922 @default.
• W2086032907 cites W2051256247 @default.
• W2086032907 cites W2060552070 @default.
• W2086032907 cites W2071492914 @default.
• W2086032907 cites W2078658097 @default.
• W2086032907 cites W2082695646 @default.
• W2086032907 cites W2082786337 @default.
• W2086032907 cites W2084886824 @default.
• W2086032907 cites W2086071403 @default.
• W2086032907 cites W2092209663 @default.
• W2086032907 cites W2094201044 @default.
• W2086032907 cites W2118267499 @default.
• W2086032907 cites W2121876311 @default.
• W2086032907 cites W2126419817 @default.
• W2086032907 cites W2136845009 @default.
• W2086032907 cites W2138234770 @default.
• W2086032907 cites W2146472525 @default.
• W2086032907 cites W2152458080 @default.
• W2086032907 cites W2152770371 @default.
• W2086032907 cites W2155818894 @default.
• W2086032907 cites W2158192250 @default.
• W2086032907 cites W2163087551 @default.
• W2086032907 cites W2164760614 @default.
• W2086032907 doi "https://doi.org/10.1371/journal.pone.0122967" @default.
• W2086032907 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4391921" @default.
• W2086032907 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/25856556" @default.
• W2086032907 hasPublicationYear "2015" @default.
• W2086032907 type Work @default.
• W2086032907 sameAs 2086032907 @default.
• W2086032907 citedByCount "51" @default.
• W2086032907 countsByYear W20860329072015 @default.
• W2086032907 countsByYear W20860329072016 @default.
• W2086032907 countsByYear W20860329072017 @default.
• W2086032907 countsByYear W20860329072018 @default.
• W2086032907 countsByYear W20860329072019 @default.
• W2086032907 countsByYear W20860329072020 @default.
• W2086032907 countsByYear W20860329072021 @default.
• W2086032907 countsByYear W20860329072022 @default.
• W2086032907 countsByYear W20860329072023 @default.
• W2086032907 crossrefType "journal-article" @default.
• W2086032907 hasAuthorship W2086032907A5008336179 @default.
• W2086032907 hasAuthorship W2086032907A5037228497 @default.
• W2086032907 hasAuthorship W2086032907A5072766650 @default.
• W2086032907 hasAuthorship W2086032907A5078197541 @default.
• W2086032907 hasAuthorship W2086032907A5080718420 @default.
• W2086032907 hasBestOaLocation W20860329071 @default.
• W2086032907 hasConcept C104317684 @default.
• W2086032907 hasConcept C150194340 @default.
• W2086032907 hasConcept C151730666 @default.

• next