FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2087277745> ?p ?o ?g. }

• W2087277745 abstract "Cellular functions are mediated by various biological processes including biomolecular interactions, such as protein-protein, DNA-protein and RNA-protein interactions in which RNA-Protein interactions are indispensable for many biological processes like cell development and viral replication. Unlike the protein-protein and protein-DNA interactions, accurate mechanisms and structures of the RNA-Protein complexes are not fully understood. A large amount of theoretical evidence have shown during the past several years that computational geometry is the first pace in understanding the binding profiles and plays a key role in the study of intricate biological structures, interactions and complexes. In this paper, RNA-Protein interaction interface surface is computed via the weighted Voronoi diagram of atoms. Using two filter operations provides a natural definition for interface atoms as classic methods. Unbounded parts of Voronoi facets that are far from the complex are trimmed using modified convex hull of atom centers. This algorithm is implemented to a database with different RNA-Protein complexes extracted from Protein Data Bank (PDB). Afterward, the features of interfaces have been computed and compared with classic method. The results show high correlation coefficients between interface size in the Voronoi model and the classical model based on solvent accessibility, as well as high accuracy and precision in comparison to classical model." @default.
• W2087277745 created "2016-06-24" @default.
• W2087277745 creator A5017567949 @default.
• W2087277745 creator A5027094623 @default.
• W2087277745 creator A5030421501 @default.
• W2087277745 creator A5031752202 @default.
• W2087277745 creator A5070809483 @default.
• W2087277745 date "2012-01-01" @default.
• W2087277745 modified "2023-09-23" @default.
• W2087277745 title "Computational analysis of RNA–protein interaction interfaces via the Voronoi diagram" @default.
• W2087277745 cites W1983534198 @default.
• W2087277745 cites W1984574291 @default.
• W2087277745 cites W2004360551 @default.
• W2087277745 cites W2006118135 @default.
• W2087277745 cites W2035503835 @default.
• W2087277745 cites W2053208573 @default.
• W2087277745 cites W2060683541 @default.
• W2087277745 cites W2063831812 @default.
• W2087277745 cites W2064515831 @default.
• W2087277745 cites W2065367476 @default.
• W2087277745 cites W2065569256 @default.
• W2087277745 cites W2075770210 @default.
• W2087277745 cites W2078290150 @default.
• W2087277745 cites W2081290596 @default.
• W2087277745 cites W2094147139 @default.
• W2087277745 cites W2102014334 @default.
• W2087277745 cites W2105918329 @default.
• W2087277745 cites W2109299965 @default.
• W2087277745 cites W2110304798 @default.
• W2087277745 cites W2113712276 @default.
• W2087277745 cites W2119966574 @default.
• W2087277745 cites W2124960852 @default.
• W2087277745 cites W2124973646 @default.
• W2087277745 cites W2125471137 @default.
• W2087277745 cites W2127828823 @default.
• W2087277745 cites W2130390259 @default.
• W2087277745 cites W2137046086 @default.
• W2087277745 cites W2141149420 @default.
• W2087277745 cites W2144714500 @default.
• W2087277745 cites W2149982649 @default.
• W2087277745 cites W2153504150 @default.
• W2087277745 cites W2169246477 @default.
• W2087277745 cites W2177731497 @default.
• W2087277745 cites W2982209274 @default.
• W2087277745 doi "https://doi.org/10.1016/j.jtbi.2011.09.033" @default.
• W2087277745 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/22004995" @default.
• W2087277745 hasPublicationYear "2012" @default.
• W2087277745 type Work @default.
• W2087277745 sameAs 2087277745 @default.
• W2087277745 citedByCount "4" @default.
• W2087277745 countsByYear W20872777452013 @default.
• W2087277745 countsByYear W20872777452017 @default.
• W2087277745 countsByYear W20872777452018 @default.
• W2087277745 crossrefType "journal-article" @default.
• W2087277745 hasAuthorship W2087277745A5017567949 @default.
• W2087277745 hasAuthorship W2087277745A5027094623 @default.
• W2087277745 hasAuthorship W2087277745A5030421501 @default.
• W2087277745 hasAuthorship W2087277745A5031752202 @default.
• W2087277745 hasAuthorship W2087277745A5070809483 @default.
• W2087277745 hasConcept C104317684 @default.
• W2087277745 hasConcept C113843644 @default.
• W2087277745 hasConcept C11804247 @default.
• W2087277745 hasConcept C119145174 @default.
• W2087277745 hasConcept C129307140 @default.
• W2087277745 hasConcept C157915830 @default.
• W2087277745 hasConcept C173608175 @default.
• W2087277745 hasConcept C186060115 @default.
• W2087277745 hasConcept C20468658 @default.
• W2087277745 hasConcept C24881265 @default.
• W2087277745 hasConcept C2524010 @default.
• W2087277745 hasConcept C33923547 @default.
• W2087277745 hasConcept C41008148 @default.
• W2087277745 hasConcept C47701112 @default.
• W2087277745 hasConcept C54355233 @default.
• W2087277745 hasConcept C55493867 @default.
• W2087277745 hasConcept C65556437 @default.
• W2087277745 hasConcept C67705224 @default.
• W2087277745 hasConcept C70721500 @default.
• W2087277745 hasConcept C86803240 @default.
• W2087277745 hasConceptScore W2087277745C104317684 @default.
• W2087277745 hasConceptScore W2087277745C113843644 @default.
• W2087277745 hasConceptScore W2087277745C11804247 @default.
• W2087277745 hasConceptScore W2087277745C119145174 @default.
• W2087277745 hasConceptScore W2087277745C129307140 @default.
• W2087277745 hasConceptScore W2087277745C157915830 @default.
• W2087277745 hasConceptScore W2087277745C173608175 @default.
• W2087277745 hasConceptScore W2087277745C186060115 @default.
• W2087277745 hasConceptScore W2087277745C20468658 @default.
• W2087277745 hasConceptScore W2087277745C24881265 @default.
• W2087277745 hasConceptScore W2087277745C2524010 @default.
• W2087277745 hasConceptScore W2087277745C33923547 @default.
• W2087277745 hasConceptScore W2087277745C41008148 @default.
• W2087277745 hasConceptScore W2087277745C47701112 @default.
• W2087277745 hasConceptScore W2087277745C54355233 @default.
• W2087277745 hasConceptScore W2087277745C55493867 @default.
• W2087277745 hasConceptScore W2087277745C65556437 @default.
• W2087277745 hasConceptScore W2087277745C67705224 @default.
• W2087277745 hasConceptScore W2087277745C70721500 @default.
• W2087277745 hasConceptScore W2087277745C86803240 @default.
• W2087277745 hasLocation W20872777451 @default.

• next