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- W2087807195 endingPage "1677" @default.
- W2087807195 startingPage "1664" @default.
- W2087807195 abstract "The NMR solution structure is reported of a duplex, 5'GUGAAGCCCGU/3'UCACAGGAGGC, containing a 4 × 4 nucleotide internal loop from an R2 retrotransposon RNA. The loop contains three sheared purine-purine pairs and reveals a structural element found in other RNAs, which we refer to as the 3RRs motif. Optical melting measurements of the thermodynamics of the duplex indicate that the internal loop is 1.6 kcal/mol more stable at 37°C than predicted. The results identify the 3RRs motif as a common structural element that can facilitate prediction of 3D structure. Known examples include internal loops having the pairings: 5'GAA/3'AGG, 5'GAG/3'AGG, 5'GAA/3'AAG, and 5'AAG/3'AGG. The structural information is compared with predictions made with the MC-Sym program." @default.
- W2087807195 created "2016-06-24" @default.
- W2087807195 creator A5013801926 @default.
- W2087807195 creator A5015478962 @default.
- W2087807195 creator A5020257959 @default.
- W2087807195 creator A5081692128 @default.
- W2087807195 creator A5086840551 @default.
- W2087807195 creator A5089055522 @default.
- W2087807195 date "2011-07-21" @default.
- W2087807195 modified "2023-09-23" @default.
- W2087807195 title "NMR structure of a 4 × 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine–purine sheared pair motif and comparison to MC-SYM predictions" @default.
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