FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2092768265> ?p ?o ?g. }

• W2092768265 endingPage "W200" @default.
• W2092768265 startingPage "W194" @default.
• W2092768265 abstract "mGenomeSubtractor performs an mpiBLAST-based comparison of reference bacterial genomes against multiple user-selected genomes for investigation of strain variable accessory regions. With parallel computing architecture, mGenomeSubtractor is able to run rapid BLAST searches of the segmented reference genome against multiple subject genomes at the DNA or amino acid level within a minute. In addition to comparison of protein coding sequences, the highly flexible sliding window-based genome fragmentation approach offered can be used to identify short unique sequences within or between genes. mGenomeSubtractor provides powerful schematic outputs for exploration of identified core and accessory regions, including searches against databases of mobile genetic elements, virulence factors or bacterial essential genes, examination of G+C content and binucleotide distribution bias, and integrated primer design tools. mGenomeSubtractor also allows for the ready definition of species-specific gene pools based on available genomes. Pan-genomic arrays can be easily developed using the efficient oligonucleotide design tool. This simple high-throughput in silico ‘subtractive hybridization’ analytical tool will support the rapidly escalating number of comparative bacterial genomics studies aimed at defining genomic biomarkers of evolutionary lineage, phenotype, pathotype, environmental adaptation and/or disease-association of diverse bacterial species. mGenomeSubtractor is freely available to all users without any login requirement at: http://bioinfo-mml.sjtu.edu.cn/mGS/." @default.
• W2092768265 created "2016-06-24" @default.
• W2092768265 creator A5038004036 @default.
• W2092768265 creator A5038111862 @default.
• W2092768265 creator A5038619601 @default.
• W2092768265 creator A5050419694 @default.
• W2092768265 creator A5060391370 @default.
• W2092768265 creator A5062482828 @default.
• W2092768265 creator A5084295430 @default.
• W2092768265 date "2010-04-30" @default.
• W2092768265 modified "2023-10-08" @default.
• W2092768265 title "mGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes" @default.
• W2092768265 cites W1991330646 @default.
• W2092768265 cites W2005001790 @default.
• W2092768265 cites W2012960603 @default.
• W2092768265 cites W2027831845 @default.
• W2092768265 cites W2055615325 @default.
• W2092768265 cites W2065328929 @default.
• W2092768265 cites W2074879055 @default.
• W2092768265 cites W2088590769 @default.
• W2092768265 cites W2098621809 @default.
• W2092768265 cites W2101610082 @default.
• W2092768265 cites W2103740237 @default.
• W2092768265 cites W2107282968 @default.
• W2092768265 cites W2111107538 @default.
• W2092768265 cites W2111676640 @default.
• W2092768265 cites W2114374509 @default.
• W2092768265 cites W2120772351 @default.
• W2092768265 cites W2124464500 @default.
• W2092768265 cites W2127096898 @default.
• W2092768265 cites W2132926880 @default.
• W2092768265 cites W2149559438 @default.
• W2092768265 cites W2156103113 @default.
• W2092768265 cites W2157748357 @default.
• W2092768265 cites W2170959083 @default.
• W2092768265 doi "https://doi.org/10.1093/nar/gkq326" @default.
• W2092768265 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/2896100" @default.
• W2092768265 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/20435682" @default.
• W2092768265 hasPublicationYear "2010" @default.
• W2092768265 type Work @default.
• W2092768265 sameAs 2092768265 @default.
• W2092768265 citedByCount "65" @default.
• W2092768265 countsByYear W20927682652012 @default.
• W2092768265 countsByYear W20927682652013 @default.
• W2092768265 countsByYear W20927682652014 @default.
• W2092768265 countsByYear W20927682652015 @default.
• W2092768265 countsByYear W20927682652017 @default.
• W2092768265 countsByYear W20927682652018 @default.
• W2092768265 countsByYear W20927682652019 @default.
• W2092768265 countsByYear W20927682652020 @default.
• W2092768265 countsByYear W20927682652021 @default.
• W2092768265 countsByYear W20927682652022 @default.
• W2092768265 crossrefType "journal-article" @default.
• W2092768265 hasAuthorship W2092768265A5038004036 @default.
• W2092768265 hasAuthorship W2092768265A5038111862 @default.
• W2092768265 hasAuthorship W2092768265A5038619601 @default.
• W2092768265 hasAuthorship W2092768265A5050419694 @default.
• W2092768265 hasAuthorship W2092768265A5060391370 @default.
• W2092768265 hasAuthorship W2092768265A5062482828 @default.
• W2092768265 hasAuthorship W2092768265A5084295430 @default.
• W2092768265 hasBestOaLocation W20927682651 @default.
• W2092768265 hasConcept C104317684 @default.
• W2092768265 hasConcept C105176652 @default.
• W2092768265 hasConcept C141231307 @default.
• W2092768265 hasConcept C189206191 @default.
• W2092768265 hasConcept C2775905019 @default.
• W2092768265 hasConcept C3742359 @default.
• W2092768265 hasConcept C54355233 @default.
• W2092768265 hasConcept C70721500 @default.
• W2092768265 hasConcept C86803240 @default.
• W2092768265 hasConceptScore W2092768265C104317684 @default.
• W2092768265 hasConceptScore W2092768265C105176652 @default.
• W2092768265 hasConceptScore W2092768265C141231307 @default.
• W2092768265 hasConceptScore W2092768265C189206191 @default.
• W2092768265 hasConceptScore W2092768265C2775905019 @default.
• W2092768265 hasConceptScore W2092768265C3742359 @default.
• W2092768265 hasConceptScore W2092768265C54355233 @default.
• W2092768265 hasConceptScore W2092768265C70721500 @default.
• W2092768265 hasConceptScore W2092768265C86803240 @default.
• W2092768265 hasIssue "suppl_2" @default.
• W2092768265 hasLocation W20927682651 @default.
• W2092768265 hasLocation W20927682652 @default.
• W2092768265 hasLocation W20927682653 @default.
• W2092768265 hasLocation W20927682654 @default.
• W2092768265 hasLocation W20927682655 @default.
• W2092768265 hasLocation W20927682656 @default.
• W2092768265 hasOpenAccess W2092768265 @default.
• W2092768265 hasPrimaryLocation W20927682651 @default.
• W2092768265 hasRelatedWork W1965562485 @default.
• W2092768265 hasRelatedWork W2056973287 @default.
• W2092768265 hasRelatedWork W2061340009 @default.
• W2092768265 hasRelatedWork W2079327011 @default.
• W2092768265 hasRelatedWork W2122125349 @default.
• W2092768265 hasRelatedWork W2149356504 @default.
• W2092768265 hasRelatedWork W2889029343 @default.
• W2092768265 hasRelatedWork W3111025641 @default.
• W2092768265 hasRelatedWork W3202542829 @default.
• W2092768265 hasRelatedWork W4319656992 @default.

• next