FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2094250612> ?p ?o ?g. }

• W2094250612 endingPage "10" @default.
• W2094250612 startingPage "1" @default.
• W2094250612 abstract "Technological advances in next-generation sequencing-based approaches have greatly impacted the analysis of microbial community composition. In particular, 16S rRNA-based methods have been widely used to analyze the whole set of bacteria present in a target environment. As a consequence, several specific bioinformatic pipelines have been developed to manage these data. MetaGenome Rapid Annotation using Subsystem Technology (MG-RAST) and Quantitative Insights Into Microbial Ecology (QIIME) are two freely available tools for metagenomic analyses that have been used in a wide range of studies. Here, we report the comparative analysis of the same dataset with both QIIME and MG-RAST in order to evaluate their accuracy in taxonomic assignment and in diversity analysis. We found that taxonomic assignment was more accurate with QIIME which, at family level, assigned a significantly higher number of reads. Thus, QIIME generated a more accurate BIOM file, which in turn improved the diversity analysis output. Finally, although informatics skills are needed to install QIIME, it offers a wide range of metrics that are useful for downstream applications and, not less important, it is not dependent on server times." @default.
• W2094250612 created "2016-06-24" @default.
• W2094250612 creator A5012875343 @default.
• W2094250612 creator A5044926937 @default.
• W2094250612 creator A5069682862 @default.
• W2094250612 creator A5074023579 @default.
• W2094250612 date "2014-01-01" @default.
• W2094250612 modified "2023-10-17" @default.
• W2094250612 title "Comparative Metagenomic Analysis of Human Gut Microbiome Composition Using Two Different Bioinformatic Pipelines" @default.
• W2094250612 cites W1480172732 @default.
• W2094250612 cites W1976381426 @default.
• W2094250612 cites W1985839994 @default.
• W2094250612 cites W1987601082 @default.
• W2094250612 cites W1989348205 @default.
• W2094250612 cites W2006690660 @default.
• W2094250612 cites W2009708459 @default.
• W2094250612 cites W2010125549 @default.
• W2094250612 cites W2023574331 @default.
• W2094250612 cites W2034285706 @default.
• W2094250612 cites W2072970694 @default.
• W2094250612 cites W2091922579 @default.
• W2094250612 cites W2102471114 @default.
• W2094250612 cites W2107243418 @default.
• W2094250612 cites W2107279356 @default.
• W2094250612 cites W2108718991 @default.
• W2094250612 cites W2124351063 @default.
• W2094250612 cites W2136145671 @default.
• W2094250612 cites W2142678895 @default.
• W2094250612 cites W2144550002 @default.
• W2094250612 cites W2147637673 @default.
• W2094250612 cites W2148223287 @default.
• W2094250612 cites W2152885278 @default.
• W2094250612 cites W2154026962 @default.
• W2094250612 cites W2159264401 @default.
• W2094250612 cites W2162058902 @default.
• W2094250612 cites W30236741 @default.
• W2094250612 cites W4236236547 @default.
• W2094250612 cites W4240888316 @default.
• W2094250612 doi "https://doi.org/10.1155/2014/325340" @default.
• W2094250612 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3955645" @default.
• W2094250612 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/24719854" @default.
• W2094250612 hasPublicationYear "2014" @default.
• W2094250612 type Work @default.
• W2094250612 sameAs 2094250612 @default.
• W2094250612 citedByCount "55" @default.
• W2094250612 countsByYear W20942506122014 @default.
• W2094250612 countsByYear W20942506122015 @default.
• W2094250612 countsByYear W20942506122016 @default.
• W2094250612 countsByYear W20942506122017 @default.
• W2094250612 countsByYear W20942506122018 @default.
• W2094250612 countsByYear W20942506122019 @default.
• W2094250612 countsByYear W20942506122020 @default.
• W2094250612 countsByYear W20942506122021 @default.
• W2094250612 countsByYear W20942506122022 @default.
• W2094250612 countsByYear W20942506122023 @default.
• W2094250612 crossrefType "journal-article" @default.
• W2094250612 hasAuthorship W2094250612A5012875343 @default.
• W2094250612 hasAuthorship W2094250612A5044926937 @default.
• W2094250612 hasAuthorship W2094250612A5069682862 @default.
• W2094250612 hasAuthorship W2094250612A5074023579 @default.
• W2094250612 hasBestOaLocation W20942506121 @default.
• W2094250612 hasConcept C104317684 @default.
• W2094250612 hasConcept C15151743 @default.
• W2094250612 hasConcept C2776321320 @default.
• W2094250612 hasConcept C41008148 @default.
• W2094250612 hasConcept C54355233 @default.
• W2094250612 hasConcept C60644358 @default.
• W2094250612 hasConcept C70721500 @default.
• W2094250612 hasConcept C86803240 @default.
• W2094250612 hasConceptScore W2094250612C104317684 @default.
• W2094250612 hasConceptScore W2094250612C15151743 @default.
• W2094250612 hasConceptScore W2094250612C2776321320 @default.
• W2094250612 hasConceptScore W2094250612C41008148 @default.
• W2094250612 hasConceptScore W2094250612C54355233 @default.
• W2094250612 hasConceptScore W2094250612C60644358 @default.
• W2094250612 hasConceptScore W2094250612C70721500 @default.
• W2094250612 hasConceptScore W2094250612C86803240 @default.
• W2094250612 hasFunder F4320322218 @default.
• W2094250612 hasLocation W20942506121 @default.
• W2094250612 hasLocation W20942506122 @default.
• W2094250612 hasLocation W20942506123 @default.
• W2094250612 hasLocation W20942506124 @default.
• W2094250612 hasLocation W20942506125 @default.
• W2094250612 hasOpenAccess W2094250612 @default.
• W2094250612 hasPrimaryLocation W20942506121 @default.
• W2094250612 hasRelatedWork W1529400504 @default.
• W2094250612 hasRelatedWork W1892467659 @default.
• W2094250612 hasRelatedWork W2078044071 @default.
• W2094250612 hasRelatedWork W2113883363 @default.
• W2094250612 hasRelatedWork W2210738511 @default.
• W2094250612 hasRelatedWork W2346515309 @default.
• W2094250612 hasRelatedWork W2607713841 @default.
• W2094250612 hasRelatedWork W2808586768 @default.
• W2094250612 hasRelatedWork W2889185930 @default.
• W2094250612 hasRelatedWork W2998403542 @default.
• W2094250612 hasVolume "2014" @default.
• W2094250612 isParatext "false" @default.
• W2094250612 isRetracted "false" @default.

• next