Matches in SemOpenAlex for { <https://semopenalex.org/work/W2099447687> ?p ?o ?g. }
- W2099447687 endingPage "W586" @default.
- W2099447687 startingPage "W581" @default.
- W2099447687 abstract "Pomelo II (http://pomelo2.bioinfo.cnio.es) is an open-source, web-based, freely available tool for the analysis of gene (and protein) expression and tissue array data. Pomelo II implements: permutation-based tests for class comparisons (t-test, ANOVA) and regression; survival analysis using Cox model; contingency table analysis with Fisher's exact test; linear models (of which t-test and ANOVA are especial cases) that allow additional covariates for complex experimental designs and use empirical Bayes moderated statistics. Permutation-based and Cox model analysis use parallel computing, which permits taking advantage of multicore CPUs and computing clusters. Access to, and further analysis of, additional biological information and annotations (PubMed references, Gene Ontology terms, KEGG and Reactome pathways) are available either for individual genes (from clickable links in tables and figures) or sets of genes. The source code is available, allowing for extending and reusing the software. A comprehensive test suite is also available, and covers both the user interface and the numerical results. The possibility of including additional covariates, parallelization of computation, open-source availability of the code and comprehensive testing suite make Pomelo II a unique tool." @default.
- W2099447687 created "2016-06-24" @default.
- W2099447687 creator A5036798094 @default.
- W2099447687 creator A5080620893 @default.
- W2099447687 date "2009-05-12" @default.
- W2099447687 modified "2023-10-17" @default.
- W2099447687 title "Pomelo II: finding differentially expressed genes" @default.
- W2099447687 cites W1505782191 @default.
- W2099447687 cites W1789015559 @default.
- W2099447687 cites W1953939973 @default.
- W2099447687 cites W1982012442 @default.
- W2099447687 cites W1987400169 @default.
- W2099447687 cites W1991320896 @default.
- W2099447687 cites W2024234800 @default.
- W2099447687 cites W2035198538 @default.
- W2099447687 cites W2035912145 @default.
- W2099447687 cites W2038818175 @default.
- W2099447687 cites W2039760291 @default.
- W2099447687 cites W2043904301 @default.
- W2099447687 cites W2052565759 @default.
- W2099447687 cites W2072546935 @default.
- W2099447687 cites W2108819945 @default.
- W2099447687 cites W2113381189 @default.
- W2099447687 cites W2116343015 @default.
- W2099447687 cites W2127287402 @default.
- W2099447687 cites W2129010206 @default.
- W2099447687 cites W2132854417 @default.
- W2099447687 cites W2140146688 @default.
- W2099447687 cites W2143303281 @default.
- W2099447687 cites W2146193195 @default.
- W2099447687 cites W2152147743 @default.
- W2099447687 cites W2167669581 @default.
- W2099447687 doi "https://doi.org/10.1093/nar/gkp366" @default.
- W2099447687 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/2703955" @default.
- W2099447687 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/19435879" @default.
- W2099447687 hasPublicationYear "2009" @default.
- W2099447687 type Work @default.
- W2099447687 sameAs 2099447687 @default.
- W2099447687 citedByCount "42" @default.
- W2099447687 countsByYear W20994476872012 @default.
- W2099447687 countsByYear W20994476872013 @default.
- W2099447687 countsByYear W20994476872014 @default.
- W2099447687 countsByYear W20994476872015 @default.
- W2099447687 countsByYear W20994476872016 @default.
- W2099447687 countsByYear W20994476872017 @default.
- W2099447687 countsByYear W20994476872018 @default.
- W2099447687 countsByYear W20994476872019 @default.
- W2099447687 countsByYear W20994476872021 @default.
- W2099447687 countsByYear W20994476872022 @default.
- W2099447687 countsByYear W20994476872023 @default.
- W2099447687 crossrefType "journal-article" @default.
- W2099447687 hasAuthorship W2099447687A5036798094 @default.
- W2099447687 hasAuthorship W2099447687A5080620893 @default.
- W2099447687 hasBestOaLocation W20994476871 @default.
- W2099447687 hasConcept C104317684 @default.
- W2099447687 hasConcept C119043178 @default.
- W2099447687 hasConcept C119857082 @default.
- W2099447687 hasConcept C121332964 @default.
- W2099447687 hasConcept C124101348 @default.
- W2099447687 hasConcept C150194340 @default.
- W2099447687 hasConcept C152724338 @default.
- W2099447687 hasConcept C166957645 @default.
- W2099447687 hasConcept C199360897 @default.
- W2099447687 hasConcept C21308566 @default.
- W2099447687 hasConcept C24890656 @default.
- W2099447687 hasConcept C2987395477 @default.
- W2099447687 hasConcept C41008148 @default.
- W2099447687 hasConcept C43126263 @default.
- W2099447687 hasConcept C54355233 @default.
- W2099447687 hasConcept C70721500 @default.
- W2099447687 hasConcept C79581498 @default.
- W2099447687 hasConcept C86803240 @default.
- W2099447687 hasConcept C91998498 @default.
- W2099447687 hasConcept C95457728 @default.
- W2099447687 hasConceptScore W2099447687C104317684 @default.
- W2099447687 hasConceptScore W2099447687C119043178 @default.
- W2099447687 hasConceptScore W2099447687C119857082 @default.
- W2099447687 hasConceptScore W2099447687C121332964 @default.
- W2099447687 hasConceptScore W2099447687C124101348 @default.
- W2099447687 hasConceptScore W2099447687C150194340 @default.
- W2099447687 hasConceptScore W2099447687C152724338 @default.
- W2099447687 hasConceptScore W2099447687C166957645 @default.
- W2099447687 hasConceptScore W2099447687C199360897 @default.
- W2099447687 hasConceptScore W2099447687C21308566 @default.
- W2099447687 hasConceptScore W2099447687C24890656 @default.
- W2099447687 hasConceptScore W2099447687C2987395477 @default.
- W2099447687 hasConceptScore W2099447687C41008148 @default.
- W2099447687 hasConceptScore W2099447687C43126263 @default.
- W2099447687 hasConceptScore W2099447687C54355233 @default.
- W2099447687 hasConceptScore W2099447687C70721500 @default.
- W2099447687 hasConceptScore W2099447687C79581498 @default.
- W2099447687 hasConceptScore W2099447687C86803240 @default.
- W2099447687 hasConceptScore W2099447687C91998498 @default.
- W2099447687 hasConceptScore W2099447687C95457728 @default.
- W2099447687 hasIssue "Web Server" @default.
- W2099447687 hasLocation W20994476871 @default.
- W2099447687 hasLocation W20994476872 @default.
- W2099447687 hasLocation W20994476873 @default.