FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2107089652> ?p ?o ?g. }

• W2107089652 endingPage "2370" @default.
• W2107089652 startingPage "2364" @default.
• W2107089652 abstract "Abstract Motivation: Neutrophil extracellular traps (NETs) are believed to be essential in controlling several bacterial pathogens. Quantification of NETs in vitro is an important tool in studies aiming to clarify the biological and chemical factors contributing to NET production, stabilization and degradation. This estimation can be performed on the basis of fluorescent microscopy images using appropriate labelings. In this context, it is desirable to automate the analysis to eliminate both the tedious process of manual annotation and possible operator-specific biases. Results: We propose a framework for the automated determination of NET content, based on visually annotated images which are used to train a supervised machine-learning method. We derive several methods in this framework. The best results are obtained by combining these into a single prediction. The overall Q2 of the combined method is 93%. By having two experts label part of the image set, we were able to compare the performance of the algorithms to the human interoperator variability. We find that the two operators exhibited a very high correlation on their overall assessment of the NET coverage area in the images (R2 is 97%), although there were consistent differences in labeling at pixel level (Q2, which unlike R2 does not correct for additive and multiplicative biases, was only 89%). Availability and implementation: Open source software (under the MIT license) is available at https://github.com/luispedro/Coelho2015_NetsDetermination for both reproducibility and application to new data. Contact: luis@luispedro.org Supplementary information : Supplementary data are available at Bioinformatics online." @default.
• W2107089652 created "2016-06-24" @default.
• W2107089652 creator A5020295523 @default.
• W2107089652 creator A5024716041 @default.
• W2107089652 creator A5027664263 @default.
• W2107089652 creator A5057086640 @default.
• W2107089652 creator A5078114370 @default.
• W2107089652 creator A5080989082 @default.
• W2107089652 creator A5082344930 @default.
• W2107089652 date "2015-03-19" @default.
• W2107089652 modified "2023-10-18" @default.
• W2107089652 title "Automatic determination of NET (neutrophil extracellular traps) coverage in fluorescent microscopy images" @default.
• W2107089652 cites W1629665956 @default.
• W2107089652 cites W1715957537 @default.
• W2107089652 cites W1984643873 @default.
• W2107089652 cites W1986296368 @default.
• W2107089652 cites W2018860370 @default.
• W2107089652 cites W2030207450 @default.
• W2107089652 cites W2040939169 @default.
• W2107089652 cites W2043756611 @default.
• W2107089652 cites W2044465660 @default.
• W2107089652 cites W2056022845 @default.
• W2107089652 cites W2073623607 @default.
• W2107089652 cites W2083653245 @default.
• W2107089652 cites W2089528923 @default.
• W2107089652 cites W2089575713 @default.
• W2107089652 cites W2098027279 @default.
• W2107089652 cites W2099540110 @default.
• W2107089652 cites W2103304264 @default.
• W2107089652 cites W2104934425 @default.
• W2107089652 cites W2108166850 @default.
• W2107089652 cites W2108303909 @default.
• W2107089652 cites W2110299641 @default.
• W2107089652 cites W2112385576 @default.
• W2107089652 cites W2114513999 @default.
• W2107089652 cites W2116927907 @default.
• W2107089652 cites W2119605622 @default.
• W2107089652 cites W2120197817 @default.
• W2107089652 cites W2123762916 @default.
• W2107089652 cites W2145752049 @default.
• W2107089652 cites W2171896402 @default.
• W2107089652 cites W2171997925 @default.
• W2107089652 cites W28412257 @default.
• W2107089652 cites W2911964244 @default.
• W2107089652 doi "https://doi.org/10.1093/bioinformatics/btv156" @default.
• W2107089652 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/25792554" @default.
• W2107089652 hasPublicationYear "2015" @default.
• W2107089652 type Work @default.
• W2107089652 sameAs 2107089652 @default.
• W2107089652 citedByCount "20" @default.
• W2107089652 countsByYear W21070896522016 @default.
• W2107089652 countsByYear W21070896522017 @default.
• W2107089652 countsByYear W21070896522018 @default.
• W2107089652 countsByYear W21070896522019 @default.
• W2107089652 countsByYear W21070896522020 @default.
• W2107089652 countsByYear W21070896522022 @default.
• W2107089652 countsByYear W21070896522023 @default.
• W2107089652 crossrefType "journal-article" @default.
• W2107089652 hasAuthorship W2107089652A5020295523 @default.
• W2107089652 hasAuthorship W2107089652A5024716041 @default.
• W2107089652 hasAuthorship W2107089652A5027664263 @default.
• W2107089652 hasAuthorship W2107089652A5057086640 @default.
• W2107089652 hasAuthorship W2107089652A5078114370 @default.
• W2107089652 hasAuthorship W2107089652A5080989082 @default.
• W2107089652 hasAuthorship W2107089652A5082344930 @default.
• W2107089652 hasBestOaLocation W21070896521 @default.
• W2107089652 hasConcept C111919701 @default.
• W2107089652 hasConcept C119857082 @default.
• W2107089652 hasConcept C124101348 @default.
• W2107089652 hasConcept C151730666 @default.
• W2107089652 hasConcept C153180895 @default.
• W2107089652 hasConcept C154945302 @default.
• W2107089652 hasConcept C160633673 @default.
• W2107089652 hasConcept C174183944 @default.
• W2107089652 hasConcept C177264268 @default.
• W2107089652 hasConcept C199360897 @default.
• W2107089652 hasConcept C2776321320 @default.
• W2107089652 hasConcept C2777904410 @default.
• W2107089652 hasConcept C2779343474 @default.
• W2107089652 hasConcept C31972630 @default.
• W2107089652 hasConcept C41008148 @default.
• W2107089652 hasConcept C86803240 @default.
• W2107089652 hasConcept C98045186 @default.
• W2107089652 hasConceptScore W2107089652C111919701 @default.
• W2107089652 hasConceptScore W2107089652C119857082 @default.
• W2107089652 hasConceptScore W2107089652C124101348 @default.
• W2107089652 hasConceptScore W2107089652C151730666 @default.
• W2107089652 hasConceptScore W2107089652C153180895 @default.
• W2107089652 hasConceptScore W2107089652C154945302 @default.
• W2107089652 hasConceptScore W2107089652C160633673 @default.
• W2107089652 hasConceptScore W2107089652C174183944 @default.
• W2107089652 hasConceptScore W2107089652C177264268 @default.
• W2107089652 hasConceptScore W2107089652C199360897 @default.
• W2107089652 hasConceptScore W2107089652C2776321320 @default.
• W2107089652 hasConceptScore W2107089652C2777904410 @default.
• W2107089652 hasConceptScore W2107089652C2779343474 @default.
• W2107089652 hasConceptScore W2107089652C31972630 @default.
• W2107089652 hasConceptScore W2107089652C41008148 @default.

• next