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- W2113089976 abstract "Gene duplication occurs by either DNA- or RNA-based processes; the latter duplicates single genes via retroposition of messenger RNA. The expression of a retroposed gene copy (retrocopy) is expected to be uncorrelated with its source gene because upstream promoter regions are usually not part of the retroposition process. In contrast, DNA-based duplication often encompasses both the coding and the intergenic (promoter) regions; hence, expression is often correlated, at least initially, between DNA-based duplicates. In this study, we identified 150 retrocopies in rice (Oryza sativa L. ssp japonica), most of which represent ancient retroposition events. We measured their expression from high-throughput RNA sequencing (RNAseq) data generated from seven tissues. At least 66% of the retrocopies were expressed but at lower levels than their source genes. However, the tissue specificity of retrogenes was similar to their source genes, and expression between retrocopies and source genes was correlated across tissues. The level of correlation was similar between RNA- and DNA-based duplicates, and they decreased over time at statistically indistinguishable rates. We extended these observations to previously identified retrocopies in Arabidopsis thaliana, suggesting they may be general features of the process of retention of plant retrogenes." @default.
- W2113089976 created "2016-06-24" @default.
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- W2113089976 date "2011-01-01" @default.
- W2113089976 modified "2023-09-27" @default.
- W2113089976 title "Retrogenes in Rice (Oryza sativa L. ssp. japonica) Exhibit Correlated Expression with Their Source Genes" @default.
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- W2113089976 cites W1978515218 @default.
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- W2113089976 cites W1982947445 @default.
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- W2113089976 cites W2000945483 @default.
- W2113089976 cites W2000972613 @default.
- W2113089976 cites W2008646367 @default.
- W2113089976 cites W2009596137 @default.
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- W2113089976 cites W2016206397 @default.
- W2113089976 cites W2019591778 @default.
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- W2113089976 cites W2028190503 @default.
- W2113089976 cites W2028536733 @default.
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- W2113089976 doi "https://doi.org/10.1093/gbe/evr111" @default.
- W2113089976 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3240961" @default.
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- W2113089976 hasPublicationYear "2011" @default.
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