FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2125855697> ?p ?o ?g. }

• W2125855697 endingPage "706" @default.
• W2125855697 startingPage "689" @default.
• W2125855697 abstract "Phylogenetic relationships among recently diverged species are often difficult to resolve due to insufficient phylogenetic signal in available markers and/or conflict among gene trees. Here we explore the use of reduced-representation genome sequencing, specifically in the form of restriction-site associated DNA (RAD), for phylogenetic inference and the detection of ancestral hybridization in non-model organisms. As a case study, we investigate Pedicularis section Cyathophora, a systematically recalcitrant clade of flowering plants in the broomrape family (Orobanchaceae). Two methods of phylogenetic inference, maximum likelihood and Bayesian concordance, were applied to data sets that included as many as 40,000 RAD loci. Both methods yielded similar topologies that included two major clades: a “rex-thamnophila” clade, composed of two species and several subspecies with relatively low floral diversity, and geographically widespread distributions at lower elevations, and a “superba” clade, composed of three species characterized by relatively high floral diversity and isolated geographic distributions at higher elevations. Levels of molecular divergence between subspecies in the rex-thamnophila clade are similar to those between species in the superba clade. Using Patterson’s D-statistic test, including a novel extension of the method that enables finer-grained resolution of introgression among multiple candidate taxa by removing the effect of their shared ancestry, we detect significant introgression among nearly all taxa in the rex-thamnophila clade, but not between clades or among taxa within the superba clade. These results suggest an important role for geographic isolation in the emergence of species barriers, by facilitating local adaptation and differentiation in the absence of homogenizing gene flow. [Concordance factors; genotyping-by-sequencing; hybridization; partitioned D-statistic test; Pedicularis; restriction-site associated DNA.]" @default.
• W2125855697 created "2016-06-24" @default.
• W2125855697 creator A5032694832 @default.
• W2125855697 creator A5079421225 @default.
• W2125855697 date "2013-06-14" @default.
• W2125855697 modified "2023-10-17" @default.
• W2125855697 title "Inferring Phylogeny and Introgression using RADseq Data: An Example from Flowering Plants (Pedicularis: Orobanchaceae)" @default.
• W2125855697 cites W1531477187 @default.
• W2125855697 cites W1965612692 @default.
• W2125855697 cites W1965692132 @default.
• W2125855697 cites W1978935242 @default.
• W2125855697 cites W1997514729 @default.
• W2125855697 cites W2009867049 @default.
• W2125855697 cites W2015775149 @default.
• W2125855697 cites W2020089203 @default.
• W2125855697 cites W2028845768 @default.
• W2125855697 cites W2031544165 @default.
• W2125855697 cites W2034525444 @default.
• W2125855697 cites W2036370098 @default.
• W2125855697 cites W2038003976 @default.
• W2125855697 cites W2038686775 @default.
• W2125855697 cites W2046535816 @default.
• W2125855697 cites W2052395225 @default.
• W2125855697 cites W2062153375 @default.
• W2125855697 cites W2085642459 @default.
• W2125855697 cites W2095882149 @default.
• W2125855697 cites W2096689134 @default.
• W2125855697 cites W2107508473 @default.
• W2125855697 cites W2108116104 @default.
• W2125855697 cites W2112113834 @default.
• W2125855697 cites W2112956791 @default.
• W2125855697 cites W2114227052 @default.
• W2125855697 cites W2114430361 @default.
• W2125855697 cites W2124351063 @default.
• W2125855697 cites W2124362779 @default.
• W2125855697 cites W2126918260 @default.
• W2125855697 cites W2128252278 @default.
• W2125855697 cites W2132926880 @default.
• W2125855697 cites W2134736922 @default.
• W2125855697 cites W2137180017 @default.
• W2125855697 cites W2141244012 @default.
• W2125855697 cites W2141850068 @default.
• W2125855697 cites W2142740946 @default.
• W2125855697 cites W2145608399 @default.
• W2125855697 cites W2148698435 @default.
• W2125855697 cites W2148966488 @default.
• W2125855697 cites W2150669045 @default.
• W2125855697 cites W2152282949 @default.
• W2125855697 cites W2155381377 @default.
• W2125855697 cites W2155470232 @default.
• W2125855697 cites W2159474015 @default.
• W2125855697 cites W2160203464 @default.
• W2125855697 cites W2161901637 @default.
• W2125855697 cites W2165140440 @default.
• W2125855697 cites W2166754225 @default.
• W2125855697 cites W2167030304 @default.
• W2125855697 cites W2168696662 @default.
• W2125855697 cites W2169773990 @default.
• W2125855697 cites W2342170703 @default.
• W2125855697 cites W4236667340 @default.
• W2125855697 doi "https://doi.org/10.1093/sysbio/syt032" @default.
• W2125855697 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3739883" @default.
• W2125855697 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/23652346" @default.
• W2125855697 hasPublicationYear "2013" @default.
• W2125855697 type Work @default.
• W2125855697 sameAs 2125855697 @default.
• W2125855697 citedByCount "446" @default.
• W2125855697 countsByYear W21258556972013 @default.
• W2125855697 countsByYear W21258556972014 @default.
• W2125855697 countsByYear W21258556972015 @default.
• W2125855697 countsByYear W21258556972016 @default.
• W2125855697 countsByYear W21258556972017 @default.
• W2125855697 countsByYear W21258556972018 @default.
• W2125855697 countsByYear W21258556972019 @default.
• W2125855697 countsByYear W21258556972020 @default.
• W2125855697 countsByYear W21258556972021 @default.
• W2125855697 countsByYear W21258556972022 @default.
• W2125855697 countsByYear W21258556972023 @default.
• W2125855697 crossrefType "journal-article" @default.
• W2125855697 hasAuthorship W2125855697A5032694832 @default.
• W2125855697 hasAuthorship W2125855697A5079421225 @default.
• W2125855697 hasBestOaLocation W21258556971 @default.
• W2125855697 hasConcept C104317684 @default.
• W2125855697 hasConcept C17966761 @default.
• W2125855697 hasConcept C193252679 @default.
• W2125855697 hasConcept C2781200638 @default.
• W2125855697 hasConcept C44465124 @default.
• W2125855697 hasConcept C54355233 @default.
• W2125855697 hasConcept C59822182 @default.
• W2125855697 hasConcept C71640776 @default.
• W2125855697 hasConcept C78458016 @default.
• W2125855697 hasConcept C8182607 @default.
• W2125855697 hasConcept C86803240 @default.
• W2125855697 hasConcept C90132467 @default.
• W2125855697 hasConcept C90856448 @default.
• W2125855697 hasConceptScore W2125855697C104317684 @default.
• W2125855697 hasConceptScore W2125855697C17966761 @default.
• W2125855697 hasConceptScore W2125855697C193252679 @default.

• next