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• W2134979439 abstract "The accurate prediction and characterization of DNA melting domains by computational tools could facilitate a broad range of biological applications. However, no algorithm for melting domain prediction has been available until now. The main challenges include the difficulty of mathematically mapping a qualitative description of DNA melting domains to quantitative statistical mechanics models, as well as the absence of 'gold standards' and a need for generality. In this paper, we introduce a new approach to identify the twostate regions and melting fork regions along a given DNA sequence. Compared with an ad hoc segmentation used in one of our previous studies, the new algorithm is based on boundary probability profiles, rather than standard melting maps. We demonstrate that a more detailed characterization of the DNA melting domain map can be obtained using our new method, and this approach is independent of the choice of DNA melting model. We expect this work to drive our understanding of DNA melting domains one step further." @default.
• W2134979439 created "2016-06-24" @default.
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• W2134979439 date "2008-12-17" @default.
• W2134979439 modified "2023-09-27" @default.
• W2134979439 title "Segmentation of DNA sequences into twostate regions and melting fork regions" @default.
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• W2134979439 doi "https://doi.org/10.1088/0953-8984/21/3/034109" @default.
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